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scnpilot_p_inoc_scaffold_57919_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(498..1217)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. R11 RepID=B7QRZ9_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 187.0
  • Bit_score: 157
  • Evalue 1.90e-35
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEB70916.1}; TaxID=439497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Rueger similarity UNIPROT
DB: UniProtKB
  • Identity: 44.9
  • Coverage: 187.0
  • Bit_score: 157
  • Evalue 2.70e-35
glycine cleavage system transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 188.0
  • Bit_score: 150
  • Evalue 6.70e-34

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Taxonomy

Ruegeria sp. R11 → Ruegeria → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
CATCGCTTCCTTGCCGCCCACCCCGAGCTGGACGTGCGCGTCTCGGCGAGCCTGATGCTCGCGAGCTTCGCCGGCGATGGCGTCGATGTGGCCATCCGCAATGCCACCGGGCCCTTTCCGGGGCTCTGGTCGCGCAAGTTCCTCGAGATCGAGACGCTGCCCATCGTCAGCCCGCGCCTCATCGAGCAGTACGGGCCGCTCGAGACCCCCGACGATCTCGCGCGCTTCCCGATCATTCATGACGACTCGCTCGGCCGCATGTTCGGCCTGCCGACCTGGATGGACTGGCTCAAGGCCGCCGGCGCCGAGCACGTGGACCTGAGCCGCGGCCTGCACTTCTCGAGCGCCGATCACGCCATCGAGGCGGCGCTCGAGGGCGCGGGCGTGCTGCTCGGCGTGCGCTCACTCGCCATTGACGATGTGCGGGTCGGGCGCCTCGTCTTCCCTCTCTCGCTGAGCCTGCGCTCGGAGCGTTCATTCCACATCGTCTGCCCGGCGGGGCATGAAAACCGGCCCAAGATCGCGGCGTTCTGCGCGTGGATCCTCGATGAGGCGGCGAAGCTCGGCCTCGCCTGCACGGACGACAGCCCGCCGCCGGTCAGCGAAGGCAAACGGGGACGCCGCAGCGTCAGCGCGGCTGGAAATGATCCCAGCCCGAACGCCCCGGCGCCAGCGGCACGCCCTCAGCGTCGAGGACGCGCACGTCAGGCCCCGACGTGA
PROTEIN sequence
Length: 240
HRFLAAHPELDVRVSASLMLASFAGDGVDVAIRNATGPFPGLWSRKFLEIETLPIVSPRLIEQYGPLETPDDLARFPIIHDDSLGRMFGLPTWMDWLKAAGAEHVDLSRGLHFSSADHAIEAALEGAGVLLGVRSLAIDDVRVGRLVFPLSLSLRSERSFHIVCPAGHENRPKIAAFCAWILDEAAKLGLACTDDSPPPVSEGKRGRRSVSAAGNDPSPNAPAPAARPQRRGRARQAPT*