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scnpilot_p_inoc_scaffold_58715_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..1203

Top 3 Functional Annotations

Value Algorithm Source
H0207B04.5 protein n=1 Tax=Oryza sativa RepID=Q01MW1_ORYSA similarity UNIREF
DB: UNIREF100
  • Identity: 38.3
  • Coverage: 402.0
  • Bit_score: 299
  • Evalue 6.90e-78
H0207B04.5 protein {ECO:0000313|EMBL:CAH65904.1}; TaxID=4530 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP similarity UNIPROT
DB: UniProtKB
  • Identity: 38.3
  • Coverage: 402.0
  • Bit_score: 299
  • Evalue 9.70e-78
retrotransposon nucleocapsid protein similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 405.0
  • Bit_score: 277
  • Evalue 8.90e-72

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Taxonomy

Oryza sativa → Oryza → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1203
GGCTTCAACATTGGTCGTGACGGATTATCTATGGTAGATGAGAAGATACAAGCAATTATCAGCTGGCCAACTCCAACCAACGTCAAACAGTTACGGTCGTTTTTGGGCCTCGCAGGCTTTTATCGCCAGTTCATTAGAATGTTTAGTGAAATTACTGCACCGTTGACAGCATTATTGCAAAAGAATACCGAATTCAAGTGGAAACAAGATCAACAGAATGCATTTGACAAACTCAAGCAAGTAATGTCAAGTAAGCCAGTACTCATACTGCCAGACGAGAACAAGCATTTTACGGTCGCCAGCGACGCAAGTGGGTTTGCAGTTGGTGCGACACTTATGCAAGATCATGGACAGGGCTTACAACCTGTAGCTTTTTTATCTAAGAAATTACTACCAGCGGAACAACGGTATCCCACCCATGAACAGGAACTCCTGTCCATTATTGTAGCGTTAAAAACCTGGAGACATTATCTGTATGGAAGAACATTTACTATCTTGACTGATCATCATAGTTTGGTCCATTTCATGAAGCAAAGCAACTTGTCCAACCGACAAGCACGTTGGTCGGAAACCCTTCAACAGTACCAATTTATGATTAAATATACACCCGGTCCCACCAATGTAGTAGCAGATGCTCTCAGCAGAAGGCACGATCATGAAGTAGGTTCGAACGACGTCAAATCAAGATCTACAGCTTCTCTTGACACTGTACCAACTCCAATCGTAGCATCAATCAACACTTCGTCGACACCAACCAGCTCAACACTCATCAATCAACTTAAACAAGCGTATGAACTTGACCCAGAGTGCAAACAAATACTACTTGAACACACCAATGGAAACAATCAATCAAACGAGTGGCAAGTAACCAGTGATGGATTGATCAAACGGCATGAACAAGTGTTAGTACCCAACGATGACACTCTCAAAACTACTATCATTAGCAGTCACCATGACGACCCAACAGCTGCTCATCGAGGTGCACTCAAGACCATCGAACTTGTTTCTCGTCGATTCTACTGGAAAAATATGCACAAGGACATCAAAGAGTACGTATCAACTTGCATCCAGTGCCAACAGAACAAATCAAGCAATCAACAACCGCTCGGACTACTTGCACCTATTCCCACGCCGGAGCAACGCTGGCACACAGTTACAATGGATCTTATCACAAGCTTACCCAAAACTAAGGCTGGACACGAT
PROTEIN sequence
Length: 401
GFNIGRDGLSMVDEKIQAIISWPTPTNVKQLRSFLGLAGFYRQFIRMFSEITAPLTALLQKNTEFKWKQDQQNAFDKLKQVMSSKPVLILPDENKHFTVASDASGFAVGATLMQDHGQGLQPVAFLSKKLLPAEQRYPTHEQELLSIIVALKTWRHYLYGRTFTILTDHHSLVHFMKQSNLSNRQARWSETLQQYQFMIKYTPGPTNVVADALSRRHDHEVGSNDVKSRSTASLDTVPTPIVASINTSSTPTSSTLINQLKQAYELDPECKQILLEHTNGNNQSNEWQVTSDGLIKRHEQVLVPNDDTLKTTIISSHHDDPTAAHRGALKTIELVSRRFYWKNMHKDIKEYVSTCIQCQQNKSSNQQPLGLLAPIPTPEQRWHTVTMDLITSLPKTKAGHD