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scnpilot_p_inoc_scaffold_58843_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 841..1203

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Beggiatoa alba B18LD RepID=I3CHN5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 118.0
  • Bit_score: 126
  • Evalue 2.40e-26
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KHD03871.1}; Flags: Fragment;; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita. similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 118.0
  • Bit_score: 132
  • Evalue 4.80e-28
polysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 116.0
  • Bit_score: 104
  • Evalue 2.80e-20

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Taxonomy

Candidatus Thiomargarita nelsonii → Thiomargarita → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
GTGTCTGCGATAAAATTAAATATCTCCGCCAACGTAATCGGTAAAGTATGGGCAGCCGCTATTGTTGTACTGCTGATACCCTTCTACATCCGTTATCTTGGTATGGAGTCATATGGCCTGGTTGGGTTTTATGGCACGCTGCTGGGATCGATGGCCATACTCGATCTGGGATTAAGCACCACCCTTAGCCGTGAACTCGCGAGGTTCCGTTCACAACCCGGCGAGGTCAGAAAAATCAGAGATCTTGCTTTTTCACTGGAGTTGATCTACTGGCTCATCGGCATTCTGATCGCGGTATTGGTGGTGGCGCTGTCAGGGTTTATCTCCACACGCTGGATCAAAGCTGAAACCCTGCCGCCGGCT
PROTEIN sequence
Length: 121
VSAIKLNISANVIGKVWAAAIVVLLIPFYIRYLGMESYGLVGFYGTLLGSMAILDLGLSTTLSRELARFRSQPGEVRKIRDLAFSLELIYWLIGILIAVLVVALSGFISTRWIKAETLPPA