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scnpilot_p_inoc_scaffold_59009_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2..1198)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3C5_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 392.0
  • Bit_score: 530
  • Evalue 1.80e-147
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 392.0
  • Bit_score: 530
  • Evalue 5.20e-148
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ACT92229.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dya similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 392.0
  • Bit_score: 530
  • Evalue 2.60e-147

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1197
CTTCCGATCTTGGTATGCGCGGCGCTGTCCCTCTTTGCCTGTAGCTTGCCCGTGCTCGTACAGAAAAACCAAAACCAGGAGCTGCCTTCCGCGTTTGGAAGCAAAAGCGATTCGGCCAGCACGGCTGCGCAGGGCTGGCGGGCATTTTTTAATGATGCAAACCTGGCGGCCCTGATAGATTCCGCCCTCGCCAATAACCAGGAATTGAACATTGTCCTGCAGGAGATCGGGATGTCGGAAAACGAAATAGAAGCCCGGAAGGGAGAATATCTTCCTTTTGTAACGCTCGGCGGAGGAATGGGGATTGAAAAAGCAGCCCGTTATACGCAGCTGGGCGCCAGCGAAGCGACTACCGATATCAAGCCGGGAAAAGAGATGCCGGAGCCCCTGGGCGACTTCAAGCTGGGCGCCTACGCCCGCTGGGAAGCAGATATCTGGCATAAGCTGAGGAATGCAAGAAAGGCCGCAGTGCATCGCTACCTGGCCTCGGTGGAGGGGAGGAACTTTATGGTCACCAACCTGGTCGGCGAGATCGCTACCTCTTATTACGAGCTTCTGGCGCTGGATAACCAGCTGCTGATAGTGGAGCAGAATATCGGTATCCAGCAAAATGCGCTGAGGATGGTAAAGCTTCAGAAAGAAGCTACCAAAGTGACTGAGCTGGCAGTGAAAAGATTTGAAGCGCAGCTCCTGAATACGCAGAGCATGCAGTTTGAGATCCGCCAGCGAATTGTCGAGACCGAGAACCGCATCAACGTCCTGGTCGGGCGGTTTCCCCAGCCCGTCGAACGGGATCACAGCAGCTTTTCGGAGCTTGTCCCCGCGAGAATCCATACCGGGACGCCGGCAGAGCTGCTCGGCAACCGCGCAGATATCCGGCAGGCGGAGCAGGAGCTGGCTGCTGCAAAGCTGGACATCCAGGTAGCCCGCGCCAGCTTTTATCCGTCTCTTGGTCTGTCGGCCAATTTTGGTATACAGGCGTTTAACCCGGCTTACCTGGCTAAGCTGCCGGAATCCCTTTTCTCGACCCTGATAGGCGATATGGCAGGCCCCATCGTAAACAAGAAGGCGATAAGAGCCGGGTATCTCAATGCCAATGCCCGCCAGATCCAGGCCATCTACAAATACGAGCAAACGGTGCTGAATGCATTTGCAGAGGTGGTCAACCAGGTGTCGAAGATCGATAACCTGGAAAGG
PROTEIN sequence
Length: 399
LPILVCAALSLFACSLPVLVQKNQNQELPSAFGSKSDSASTAAQGWRAFFNDANLAALIDSALANNQELNIVLQEIGMSENEIEARKGEYLPFVTLGGGMGIEKAARYTQLGASEATTDIKPGKEMPEPLGDFKLGAYARWEADIWHKLRNARKAAVHRYLASVEGRNFMVTNLVGEIATSYYELLALDNQLLIVEQNIGIQQNALRMVKLQKEATKVTELAVKRFEAQLLNTQSMQFEIRQRIVETENRINVLVGRFPQPVERDHSSFSELVPARIHTGTPAELLGNRADIRQAEQELAAAKLDIQVARASFYPSLGLSANFGIQAFNPAYLAKLPESLFSTLIGDMAGPIVNKKAIRAGYLNANARQIQAIYKYEQTVLNAFAEVVNQVSKIDNLER