ggKbase home page

scnpilot_p_inoc_scaffold_59011_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 283..996

Top 3 Functional Annotations

Value Algorithm Source
integrase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 208.0
  • Bit_score: 314
  • Evalue 1.70e-82
IS5 family transposase orfB id=12557364 bin=CNBR_ACIDO species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 137.0
  • Bit_score: 278
  • Evalue 7.50e-72
integrase similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 226.0
  • Bit_score: 237
  • Evalue 4.10e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_67_21 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGCACGCCTCGTTCACCGGCGGCCGTGGCTACTACGGCAGCCCACGCATCCACGATGACTTCGTCGAGTGGGGCGAGCATGTCAGTCGGAAGCGGATCATCCGGTTGATGCGGGAAGACGGCCTGAAAGCTCGCGTGCGCAAGCGGTACAAGGTCACGACGGACAGTGACCATGACCAGCCCATCGCGGCCAACCTGCTGCAACAGGACTTCTCCGCAGACCGTCCCAACCAGCGGTGGGCCGGCGATACGAGCGAGCTGCGCATCGGCGAGCAGGGGCGCGCCTACCTAGCGGTGGTGTTGGACCTGTACTCGAGGTTCGTCGTCGGCTGGGCCATCAGTGCCGTCAACAACCGCCATCTCACCATCAAGGCGCTCGAGATGGCGGTGAAGCGGCGGTGCCCAGGTCTCGGCTTGCTCCACCACTCCGATCAGGGCTCAACCTACGCCAGTGAGGACTACCAAGACGTCCTGACCGCGTACGGCATCACCTGCAGCATGAGTCGTCGCGGCAACTGCTACGACAACGCCGTCGTCGAAGCGTTCTTCTCGACGGTCAAGAGCGAGATCGGCGAGCGGTTCGCCAGTCACGGCGACGCGAAGATGGAGTTGTTCGACTACATCGAAGTGTTCTATAACCAGCGTCGGCGGCACTCGGCCGCCGGCCGCATGAGTCCGGCCGCGTACGAGCGGCGGCTGACTCAAGCCGCGTAG
PROTEIN sequence
Length: 238
MHASFTGGRGYYGSPRIHDDFVEWGEHVSRKRIIRLMREDGLKARVRKRYKVTTDSDHDQPIAANLLQQDFSADRPNQRWAGDTSELRIGEQGRAYLAVVLDLYSRFVVGWAISAVNNRHLTIKALEMAVKRRCPGLGLLHHSDQGSTYASEDYQDVLTAYGITCSMSRRGNCYDNAVVEAFFSTVKSEIGERFASHGDAKMELFDYIEVFYNQRRRHSAAGRMSPAAYERRLTQAA*