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scnpilot_p_inoc_scaffold_59907_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(688..1185)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FW06_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 165.0
  • Bit_score: 307
  • Evalue 8.10e-81
  • rbh
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEI92887.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 165.0
  • Bit_score: 307
  • Evalue 1.10e-80
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 162.0
  • Bit_score: 277
  • Evalue 3.30e-72

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Taxonomy

Sphingobacterium spiritivorum → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 498
CGTGAAAATATCGAACTTGTTCCGGTTAAGGCTAGTGCGGGGTATTTAAATGGATATGGTGATCCAGAATATGTTGCTGAGTTGCCAAAGTTTTCGCTACCTATGTTTGGTCAGGGGACATTTCGTGCTTTTGAAATAAAAGGGGATTCGATGTTGCCTTTACCTTCTGGTTCTATTATTGTGGCCGAATACGTAGAAAATTGGCATGATATTAAACCAGGAAGTACCTATATTGTCGTGTCGAAAGAAGATGGTGTGGTGTATAAACGCGTTGCTTTTAAATTTAAAGAGGATAAAGGTTTGAAGCTTGTTTCTGATAATAAGACCTATGAGCCTTATTGGGTAGAGACTGCTGATATTCTTGAAGTGTGGAAGGCTAAGGCTTTTATCAGTACACAGCTGCCCGAACCTACTCCGGAGCCAACCATAGAAACCCTGACAAGCATGATGGCGCAAATGCAGAAGACGATTAATGCAGTGGTGGATGGTTCTAAATAG
PROTEIN sequence
Length: 166
RENIELVPVKASAGYLNGYGDPEYVAELPKFSLPMFGQGTFRAFEIKGDSMLPLPSGSIIVAEYVENWHDIKPGSTYIVVSKEDGVVYKRVAFKFKEDKGLKLVSDNKTYEPYWVETADILEVWKAKAFISTQLPEPTPEPTIETLTSMMAQMQKTINAVVDGSK*