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scnpilot_p_inoc_scaffold_59942_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..560)

Top 3 Functional Annotations

Value Algorithm Source
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBP2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 189.0
  • Bit_score: 224
  • Evalue 1.00e-55
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EEF62927.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pe similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 189.0
  • Bit_score: 224
  • Evalue 1.40e-55
EmrB/QacA subfamily drug resistance transporter similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 185.0
  • Bit_score: 218
  • Evalue 2.00e-54

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 558
ATGAACCAGATCGCGCCATCCCCCTGCGACCGCGGCCTCGTCCGCGCGGCCGAGCCTTGCGAGACCCGGCCGCGCGCGAACCTCGCTCTTGCCGGGGCGGTGGTCGGGTCCAGCCTGGCCTTCATCGACGGCTCGGCGGTCAATTTGGCTCTGCCGGTCATCCAGGCCCAGATCGGCGGCGACGCCGCGGCGATCCAGTGGGTGATGAATGCTTACGCCCTGACCCTCGGGGCGCTGGTGCTGGTTGGCGGCGCGGCCGCCGATCGTTATGGACGCCGCGCGGTGTTTGTGGTCGGCGTCCTGGTCTTCGCCGGGGCCTCTGCGCTTTGTGGCGCGGCGCCCAGCCTGCCCATGCTGATCATGGCCCGTGCGGTCCAAGGGCTAGGGGCGGCTTTGCTAGTGCCCGCCAGCCTGGCCTTGCTGGGCGCGGCCTTCGACGAAAAGCGGCGCGGCTGGGCGGTCGGCGTCTGGGCTGGCGCCAGCGGGCTGATGAGCGCCATCGGCCCTGTTCTGGGCGGCTGGCTGGCCGAGTCGGTCTCGTGGCGCGCCGTCTTTCTG
PROTEIN sequence
Length: 186
MNQIAPSPCDRGLVRAAEPCETRPRANLALAGAVVGSSLAFIDGSAVNLALPVIQAQIGGDAAAIQWVMNAYALTLGALVLVGGAAADRYGRRAVFVVGVLVFAGASALCGAAPSLPMLIMARAVQGLGAALLVPASLALLGAAFDEKRRGWAVGVWAGASGLMSAIGPVLGGWLAESVSWRAVFL