ggKbase home page

scnpilot_p_inoc_scaffold_62395_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(949..1149)

Top 3 Functional Annotations

Value Algorithm Source
Heat-inducible transcription repressor hrcA n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JXJ8_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 66.0
  • Bit_score: 131
  • Evalue 4.20e-28
heat-inducible transcription repressor HrcA similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 66.0
  • Bit_score: 131
  • Evalue 1.20e-28
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomic similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 66.0
  • Bit_score: 131
  • Evalue 5.80e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 201
GAAGGCGTACGCATTTTCATCGGTTCCGAGAACAAGTTGTTTTCACTGTCCGGATCGTCTCTGATCGTCGCACCGTTCCGCGATCAAACACGTCATGTGGTCGGCGTCCTGGGCGTGATCGGCCCGACGCGGCTGAATTACGCTCGCATTATCCCGATGGTCGATTACACAGCGAAGCTGGTCAGCCGTCTCATTCCTTAA
PROTEIN sequence
Length: 67
EGVRIFIGSENKLFSLSGSSLIVAPFRDQTRHVVGVLGVIGPTRLNYARIIPMVDYTAKLVSRLIP*