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scnpilot_p_inoc_scaffold_59145_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 76..519

Top 3 Functional Annotations

Value Algorithm Source
Putative transposase n=1 Tax=Variovorax paradoxus B4 RepID=T1X4G0_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 83.4
  • Coverage: 145.0
  • Bit_score: 241
  • Evalue 6.30e-61
putative transposase similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 145.0
  • Bit_score: 241
  • Evalue 1.80e-61
Putative transposase {ECO:0000313|EMBL:AGU47488.1}; Winged helix-turn helix domain-containing protein {ECO:0000313|EMBL:AGU51123.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 145.0
  • Bit_score: 241
  • Evalue 8.80e-61

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
ATGCGCCAGACGCAACTGAAGCTGACCGAGCAAGACCGCTCGGCGATCGACGAGATTCGCAGCAAGGGCCTGCATCATTCGCGAGAAGTCAATCGAGCTCATGCGCTGTCCTGCCTGGATCGCGGGATTCCCGAGACCCAGATCATGGCCGTGCTGAGAATCGGGCGCACGGCCTTGTGGCGCACCCGCTTGGCGTATTTGCAAGGCGGCGTGGAATTGGCGGTGTTCGACGTGGCTCGCTCCGGACGGCCGACGCAGTACGACACGGACGCCCAGGCTCGGGTAGCTGCGTTGGCGTGCTCGACACCGCCCAAGGGGCGCCAGCGCTGGACGATCGTGGAACTCGAACGCGCTGCACGCCAGGAGCCGGGCCTGGGCAAGCTCAGTCGCGAGACCGTTCGACGGATGTTAAAAAAAACGCCCTCAAGCCCTGGCGCAAGGTGA
PROTEIN sequence
Length: 148
MRQTQLKLTEQDRSAIDEIRSKGLHHSREVNRAHALSCLDRGIPETQIMAVLRIGRTALWRTRLAYLQGGVELAVFDVARSGRPTQYDTDAQARVAALACSTPPKGRQRWTIVELERAARQEPGLGKLSRETVRRMLKKTPSSPGAR*