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scnpilot_p_inoc_scaffold_59227_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(44..262)

Top 3 Functional Annotations

Value Algorithm Source
Putative HTH-type transcriptional regulator y4mF n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X695_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 71.0
  • Bit_score: 119
  • Evalue 1.00e-24
spsC; putative HTH-type transcriptional regulator y4mF similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 71.0
  • Bit_score: 121
  • Evalue 1.30e-25
Putative HTH-type transcriptional regulator y4mF {ECO:0000313|EMBL:AFL51401.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer g similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 71.0
  • Bit_score: 121
  • Evalue 6.50e-25

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 219
GTGAGAAGTCCCGCCGAGGTCGGCGCACTGGTTCGTAGCGCACGCAAAGAGCAAAGTTTGCGGCAGGATGAACTTGCCGGTGTTGCGGGCGTTGGGCTGCGCTTCATTGTTGATCTTGAGGCGGGCAAGCCCACAGCTCAAATTGGTAAGGTAATGCAAGTTCTTCGGACGCTTGGTTATGTAATCGAAATTTCAGCACCGGGTGAACGCAGGCCTTAA
PROTEIN sequence
Length: 73
VRSPAEVGALVRSARKEQSLRQDELAGVAGVGLRFIVDLEAGKPTAQIGKVMQVLRTLGYVIEISAPGERRP*