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scnpilot_p_inoc_scaffold_62577_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 3..173

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00035ED255 similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 51.0
  • Bit_score: 82
  • Evalue 1.90e-13
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 52.0
  • Bit_score: 79
  • Evalue 3.40e-13
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB42522.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma li similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 52.0
  • Bit_score: 79
  • Evalue 1.70e-12

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 171
CAGCAGCAGGCGATCTACCTGCGTTTTTACGAGCACTTCAGCAACGAGGAAATTGCGCGGCTGATGGGTGTGAATTACCACTCCGCCTGCCGTTTCATTTATAGCGGCCTGAAATACCTGAAGGAGGCGGTACGCATCTTAGGACTCTCTCTTTTTCTTTTCAAATTCTAA
PROTEIN sequence
Length: 57
QQQAIYLRFYEHFSNEEIARLMGVNYHSACRFIYSGLKYLKEAVRILGLSLFLFKF*