ggKbase home page

scnpilot_p_inoc_scaffold_62669_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 255..995

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide deacetylase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TRV2_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 30.5
  • Coverage: 223.0
  • Bit_score: 99
  • Evalue 5.00e-18
Polysaccharide deacetylase {ECO:0000313|EMBL:AKB41516.1}; TaxID=1434117 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcin similarity UNIPROT
DB: UniProtKB
  • Identity: 32.2
  • Coverage: 267.0
  • Bit_score: 110
  • Evalue 3.90e-21
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 30.5
  • Coverage: 223.0
  • Bit_score: 99
  • Evalue 1.40e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina mazei → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 741
ATGATTCCTTATTCTTTAGGCATATTATTAGAAAATCTTAAATCTCTAAGGAAAAACAAGGTTTTTATTTGCGCTAGAGAGGTAATTAGTAACAAGGAATTACCCCCTCATGCCATTATGTTACGATTTGATGTAGAAAGAAACCTCCCGCATCATAAATTTATCGCTTATGAATTAAATCAATTAAACATTCCTGCTACATTTTATTTTCACACGCGAAAAAATACATATGATGTAGATATCTTAAAAGGCATACAGGACTTAGGGCATGAAATCGGGTTTCATCACGAAGCTCTAGACAGATGCAAGGGAAATTTTGAACAAGCGAAAGAATTATTTACTCAAGAAGTTCTCAGGTTCCAACAAGATGGCTTTGATATACAAACAGTATGTAGCCATGGTGAGCTGGGTTTAAAGAAAAACGGCTATAAAACCAATCATGATTTATTTAAAAAATACCCCACCCTATTGAAGGAATTGGATCTAAAAGGGGAAGTTTATCTCGATATACTAGGAAAAATAGAACAAAATTATATTAGTGATACGTTTAAAGCATCCTCCAGGTTTTATAAAAAACTACACAATATAACGCAAGATCCTAAACTTACCCAAATACTTGTCCATCCTCATAGATGGCAATACAACCTTTTAAAAACCTTAATTGAAGTTAATATCGGTTTGTCTCAGGCCATCCTTAATAGGATATCAGGTCACAGAAAATATATAACCGTCATGGATTAG
PROTEIN sequence
Length: 247
MIPYSLGILLENLKSLRKNKVFICAREVISNKELPPHAIMLRFDVERNLPHHKFIAYELNQLNIPATFYFHTRKNTYDVDILKGIQDLGHEIGFHHEALDRCKGNFEQAKELFTQEVLRFQQDGFDIQTVCSHGELGLKKNGYKTNHDLFKKYPTLLKELDLKGEVYLDILGKIEQNYISDTFKASSRFYKKLHNITQDPKLTQILVHPHRWQYNLLKTLIEVNIGLSQAILNRISGHRKYITVMD*