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scnpilot_p_inoc_scaffold_62871_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..1143

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; Flags: Fragment;; TaxID=281847 species="Eukaryota; Fungi; Cryptomycota; Rozella.;" source="Roz similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 382.0
  • Bit_score: 435
  • Evalue 8.30e-119
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 192.0
  • Bit_score: 212
  • Evalue 2.30e-52
DNA-directed RNA polymerase (Fragment) n=1 Tax=Rozella allomycis RepID=Q2PYS8_9FUNG similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 382.0
  • Bit_score: 435
  • Evalue 5.90e-119

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Taxonomy

Rozella allomycis → Rozella → Cryptomycota → Fungi

Sequences

DNA sequence
Length: 1143
ATTGCGGCTGCTAAGGATGGTGTGCGTAAGATCATCATTCAAGCTCGTGAAAATAAGCTTTCTTGCTTGCCTGGTTTGACGTTGAGGGAAAGTTTCGAAGCTGAAGTCAACAAACTACTCAATCGAGCTCGTGACACTTCTGGTACATCAGCTCAGCGTAGTTTGAAGGAACAAAACAATGTCAAACAAATGGTCGTGGCTGGTAGCAAGGGTAGTTTCATTAACATTTCTCAAATGACTGCTTGTGTGGGGCAACAAAACGTAGAAGGAAAGCGTATTCCATTTGGTTTCCGTCATCGAACCCTGCCTCACTTCACCAAAGACGATTATGGACCGGAATCGAGAGGATTTGTAGAAAATTCCTATTTGCGTGGTTTGACTCCTCAAGAATTCTTCTTTCACGCCATGGGTGGTCGTGAAGGGTTGATTGATACGGCGGTGAAGACTGCGGAAACTGGGTACATTCAAAGACGCTTGGTTAAAGCCATGGAAGATGTCATGGTCAGATACGATGGAACAGTTCGTAACGCTGGTGGTGACATTCTTCAATTCGCTTACGGTGAAGATGGAATGGATGCAGCAGCTTTGGAACGTCAAACTATCGATTTAATGCGCTGGAATGACGTTGAATTTGCTAAACGCTGTAGAATTGATGTAACTGACGCCAAATCCATGCTTCCGGCTAGTTGTTTGCGTCCTGAGTTGTTTGAAGCTCTGCTAGTTGATTCACAAGTAGCTTCAGCTTTGGACTCGGAATGGAATGAATTGTGCGCTTTGAGACAAGCATTAAGAGCAACTGGTAGTACAGAAGTTGCTCGTGCTCTTCCTGTCAATGTAGTTAGAACCATTTGGGATGCTCAGCGTATTTTCCGACTTGATCCTCGTCAACCATCCGATTTGGACCCAATTGAGTGTATTTCCAAGTTGAATGCTCTCATTGACCGTCTTCAACAGTCAGTTTTTCCGGGTGCTTCAGCTACCCTGATGCAAATAGATGCCAGGGAGAATGCGACACTTTGCTTGCGAGCCTTGTTAAAGAGCAGTTTGTGTGTTCGTCGAGTATTGCAAGAACATTACTTGTCAGCGACAGCATTTGATTGGTTGTTGGGTGAAATTGAATCACGTTTCGGGGCAGCTATTGTA
PROTEIN sequence
Length: 381
IAAAKDGVRKIIIQARENKLSCLPGLTLRESFEAEVNKLLNRARDTSGTSAQRSLKEQNNVKQMVVAGSKGSFINISQMTACVGQQNVEGKRIPFGFRHRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVRYDGTVRNAGGDILQFAYGEDGMDAAALERQTIDLMRWNDVEFAKRCRIDVTDAKSMLPASCLRPELFEALLVDSQVASALDSEWNELCALRQALRATGSTEVARALPVNVVRTIWDAQRIFRLDPRQPSDLDPIECISKLNALIDRLQQSVFPGASATLMQIDARENATLCLRALLKSSLCVRRVLQEHYLSATAFDWLLGEIESRFGAAIV