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scnpilot_p_inoc_scaffold_62894_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..1470

Top 3 Functional Annotations

Value Algorithm Source
Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Oryza sativa subsp. japonica RepID=Q7G209_ORYSJ similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 199.0
  • Bit_score: 188
  • Evalue 2.10e-44
DNA/RNA polymerases superfamily protein {ECO:0000313|EMBL:EOY31837.1}; TaxID=3641 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledo similarity UNIPROT
DB: UniProtKB
  • Identity: 39.4
  • Coverage: 279.0
  • Bit_score: 201
  • Evalue 3.40e-48
uncharacterized LOC101490907 similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 207.0
  • Bit_score: 164
  • Evalue 7.80e-38

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Taxonomy

Theobroma cacao → Theobroma → Malvales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1470
AAAAAAATACTAAGCTCATTAGTCACTGGTGTCACTAATGAGCACACATTCCAAAAGAATATACCACCTAAACCACCAGACACTTCTCCAGTTACCAATCAACTTCACAACAACATCAATCAAGAACCAACTCCACACTTGAATCAACTATCTGCTCATGAACCTTCGCTTTGTACTCTCTCTGGACCCAGTGCACCCAATGTCTCCAAGTTACTCAAGTTAAATTGTATTGTCAATGACTGGATCAATGCGACAGTGTTGGTCGACTCCGGGGCAGCTTGTTGTTTCGTGAGTAGAGCGTTTGTTCGAGCTAACAGCTTAGAATTACTCCAGGGAGCTGATTACAACATTACGTTAGCTGATAATTCAACCACACGTACCAACGAGATCGTTTCATTAACGTTACACTTCTGCAACATCAAGTTTACCATGACGGCGATCGTCATTGATGCATTAGCATGTGGCGATATCATATTAGGTATCAACTTTCTCAAATGTTTCAACCCCACCATTGATTGGAAGAAATCCACCATCGACATCGACATCAACAACTACACACCAGCTCCACATGACAACATGTCCACATCTGACATCGTACTTGCTTCGTTTCATGTCATACCATCAAGCTCCAACTCGTCCCCTAGTACCCCCGACACCACCGTTCAATCGGAAGAACATCGAATCAAACTAGTCTCTCGTCGCACTATGAAATCATTGCTCAAAGATAACACCACCGTACCGTTGTGTTCCATTTACTTGTTACCAACTTCCACTGACTCCATATCAACTTCGAATGTACCCTTGCAATCTGTCCAAATCATGAGCGGATTGAACAGCAAGTACGACGACACCACTGCCAACACCGCCAAACACTCGTACAATGAACATGAACAACGAATACATGCTGAGTTCAAAGATATATTCGAAACCATGCCACCTGGACTACCACCGAAACGTGAACATGATCATGCTATTGAATTAATTCCTGGATCACAACCACCTGCTAAGTCTGCTTACCGATTATCATTGACTGAATTAGATGAATTACGAAAGCAGCTGGACAAACTACTAGCAAATGGATTGATACGAGCATCAAAATCAGCATTCGGTGCACCTATGCTTTTTGTAAAGAAAAAAGACGGGGACATACACAAAACTGCGTTCAGAACGAGGTACGGATCGTTCGAGTTTCTTGTCCTCCCGTTTGGTCTTACTAATGCACCCAGCACATTTATGCAGATGATGCAGGACATTATGAAACCGTACTTGGATCGATTCGTCATTAGCTTCTTGGATGATATTTTGATATACAGTAACACTCTGGAACAACATCAACAACATGTACGTGAAGTACTACAAACACTACGTGAACACAAACTGTACGTCAAACAATCCAAGTGCGAGCTATTCAAGAATCAAGTCGAGTTCCTGGGCTTCAACATTGGTCGTGACGGATTATCTATGGTAGAT
PROTEIN sequence
Length: 490
KKILSSLVTGVTNEHTFQKNIPPKPPDTSPVTNQLHNNINQEPTPHLNQLSAHEPSLCTLSGPSAPNVSKLLKLNCIVNDWINATVLVDSGAACCFVSRAFVRANSLELLQGADYNITLADNSTTRTNEIVSLTLHFCNIKFTMTAIVIDALACGDIILGINFLKCFNPTIDWKKSTIDIDINNYTPAPHDNMSTSDIVLASFHVIPSSSNSSPSTPDTTVQSEEHRIKLVSRRTMKSLLKDNTTVPLCSIYLLPTSTDSISTSNVPLQSVQIMSGLNSKYDDTTANTAKHSYNEHEQRIHAEFKDIFETMPPGLPPKREHDHAIELIPGSQPPAKSAYRLSLTELDELRKQLDKLLANGLIRASKSAFGAPMLFVKKKDGDIHKTAFRTRYGSFEFLVLPFGLTNAPSTFMQMMQDIMKPYLDRFVISFLDDILIYSNTLEQHQQHVREVLQTLREHKLYVKQSKCELFKNQVEFLGFNIGRDGLSMVD