ggKbase home page

scnpilot_p_inoc_scaffold_62968_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(426..1139)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=2 Tax=Rhizobium meliloti RepID=F6BZJ7_SINMB similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 194.0
  • Bit_score: 285
  • Evalue 3.60e-74
Transcriptional regulator,LysR family similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 194.0
  • Bit_score: 285
  • Evalue 1.00e-74
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AAK65470.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinor similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 194.0
  • Bit_score: 285
  • Evalue 5.00e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sinorhizobium meliloti → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
CGTGTTGCGCCGCGACGCGCTCGCCTGATCGACAATCGCCGTTTGCTGACGCACACTGGTTGCCTACAGAGCGAATGGATCAGCATGGCGCATCATCATCTCCCGGCCAGCCCGAAGACCTGCCACTGGGGTTTCTTTGAAGCGAAGCTGCGGCCGGTTCTTGCCGAGTATCCCGATATCAAGCTCGAATTCAGCCGGGACAATGGTTTCCGCGATATCGTGGAGGATGGGTTCGATGCCGGCGTCCGGCTCGGCGAGACGGTGGAGAAGGATATGATCGCGGTGCGCATCGGTCCAGATTGGCGGCTGGTTGCCGTGGGCGCGCCGGACTATTTTGCGGCGCGCGGCATTCCGCAGACACCGCAGGATCTCGTGCACCACAATTGCATCTGCCTGCGCCTGACGACCGCCGGCGGGCTTTACGCCTGGGAATTCCAGAGAGACGGTCGGGATATCCGCATGCGTGTAGACGGCCAGCTTACCTTCAATTCGACACTTCCGATGGTCGAAGCTGCGCTTGCCGGCTACGGCATCGCCTATGTGCCGGAAGATATCGTGGCGGACCACATCGCCGCCGGCCGGCTGCACATCGCCCTCGACGAATGGTCTCCGCCTTTTGCCGGGTACTATCTCTACTATCCAAGCCGACGGCAAAATGCTCCCGCTTTCAGAATCGTGCTCGACGCCTTGCGGGACCGTGAGGCGTGTCGATAG
PROTEIN sequence
Length: 238
RVAPRRARLIDNRRLLTHTGCLQSEWISMAHHHLPASPKTCHWGFFEAKLRPVLAEYPDIKLEFSRDNGFRDIVEDGFDAGVRLGETVEKDMIAVRIGPDWRLVAVGAPDYFAARGIPQTPQDLVHHNCICLRLTTAGGLYAWEFQRDGRDIRMRVDGQLTFNSTLPMVEAALAGYGIAYVPEDIVADHIAAGRLHIALDEWSPPFAGYYLYYPSRRQNAPAFRIVLDALRDREACR*