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scnpilot_p_inoc_scaffold_63403_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(434..1135)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HV94_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 232.0
  • Bit_score: 360
  • Evalue 1.50e-96
  • rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:KGE66875.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 231.0
  • Bit_score: 364
  • Evalue 1.40e-97
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 231.0
  • Bit_score: 358
  • Evalue 1.60e-96

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
CTGCAAATGAATGCCACCGAACAAGCGCCCCAGGCGCGCCTGCTGACCCCAGCCGAACTAGCCCTCTGCGTCCGGCTGTTCCGGGAGATGCGCCAATGGTCGCAAGAGCAACTGGCCGAGATTTCTGGCCTCAATGTGCGCACCCTCCAGCGGGTCGAGCAAGGGCAGGTAGCCAGTCTGGACACCCGGCGCGCACTCGCCCGCGCGTTCGAGTTCGAAGACGTGGACGCACTGAACAAGCCGTTCACGATCCCGACGGCAGAGGAGCTTAAGGCCCAGAAGGAGAAATTCGATCGCGAGCATGTCACGCTGACCGCGTTGCCGCTCACGACTGGAAAGCAGTTGGCGAAACTGGCCGAGCTCCACATGATGGATCTGTCGGAGTCCGGGCTCGAACTCAGCCGCGAGGCCGACGAAACCTTTGTCGAGCTGGTGGACTACTTTCGCGACTACCGCGATTGCGCCGACGCGTACTCGGAGTCGACGAAGTTCGAGGTGTACGACGAACTGCAGTCGCGGATCGATGCGCTGAAAACGCTCGGCGTCTCGCTTCGCTATGCCGAGCGCAAGATGCACGTGAAGTGGGGCGTGGAGACAGACGCAAAGCCAATGCCGGTCAGCGTCCTGTACGTCGTGGCCTTTCCGCTCGGCAAGGAACCCGACCAGTTCGCTACGCCCAAGTCGGGCGGCATCCGCCTCTAG
PROTEIN sequence
Length: 234
LQMNATEQAPQARLLTPAELALCVRLFREMRQWSQEQLAEISGLNVRTLQRVEQGQVASLDTRRALARAFEFEDVDALNKPFTIPTAEELKAQKEKFDREHVTLTALPLTTGKQLAKLAELHMMDLSESGLELSREADETFVELVDYFRDYRDCADAYSESTKFEVYDELQSRIDALKTLGVSLRYAERKMHVKWGVETDAKPMPVSVLYVVAFPLGKEPDQFATPKSGGIRL*