ggKbase home page

scnpilot_p_inoc_scaffold_63457_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1..582)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, PadR-like family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TPU6_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 132.0
  • Bit_score: 134
  • Evalue 8.40e-29
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:EFH87531.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 132.0
  • Bit_score: 134
  • Evalue 1.20e-28
PadR-like family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 149.0
  • Bit_score: 119
  • Evalue 7.90e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ktedonobacter racemifer → Ktedonobacter → Ktedonobacterales → Ktedonobacteria → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 582
ATGATTTCAGATGCGATGCCAACCGAATATGCCCTGTTGGGTCTACTCCTTGACGGCCCAAAACACGGCTACGAACTGGCCCGGCGTTTTTCGCCCGAAATGGCCCTGGGCGAGATTTGCCACCTCGAAATGAGTATGCTCTATGCCTTGCTCAAAAAACAGGAAAAGGCCGGGCATATCGAGGCCGAACTGGAAAGCCAGGGCGCCCGGCCACCCAAACGGGTCTTTCACCTGACCCCCCTGGGACGGGCCGCTTTTATGGAGTGGGTGCGGACCCCGGTCGGTCGGGCGCGGGACATCCGGCTCGATTTCCTGGTCAAACTCTATTTTGCCCGCCAGCTTGGGGTGGACGATGTGCTGGCCCTGATTGACCGGCAGCTTGAGATTTGCCTGTCCCTCAGCGATCGCCTGGAGCGCGGGGTCGGCCTGAACGAAGACCTCGACGATTTGATGAGTATCAGCGCGGGGAACTATAGCGGGTTCGATTCCAACGAGGAAGACGAGCTTTACCAGCGCACCGGAGGACGCCGCAGCCATCCCCGCCCCAGCGAGCAGGAACTCAACCGCCACCGCACCGCCGAC
PROTEIN sequence
Length: 194
MISDAMPTEYALLGLLLDGPKHGYELARRFSPEMALGEICHLEMSMLYALLKKQEKAGHIEAELESQGARPPKRVFHLTPLGRAAFMEWVRTPVGRARDIRLDFLVKLYFARQLGVDDVLALIDRQLEICLSLSDRLERGVGLNEDLDDLMSISAGNYSGFDSNEEDELYQRTGGRRSHPRPSEQELNRHRTAD