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scnpilot_p_inoc_scaffold_63614_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 937..1131

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 65.0
  • Bit_score: 72
  • Evalue 1.80e-10
PREDICTED: DNA-directed RNA polymerase subunit 2-like n=1 Tax=unknown RepID=UPI0001924CDE similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 65.0
  • Bit_score: 82
  • Evalue 1.70e-13
similar to DNA-DIRECTED RNA POLYMERASE II SECOND LARGEST SUBUNIT similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 65.0
  • Bit_score: 82
  • Evalue 5.20e-14

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Taxonomy

Coccomyxa subellipsoidea → Coccomyxa → Trebouxiophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 195
ATGGAACGTGATGCAATTATTGCGCACGGAATGGCATTATTCCTCAAAGAAAAATTAGTTGATACATCGGATGCGTACAGTACTTTTGTATGCGATAAATGTGGATTATTTGCACAAAGATTATTTAGAAAAGGTAATCAGTCACATACAACTAGTAAAGATGTATATTTCTGTCCATCTTGTAAAAATTATACT
PROTEIN sequence
Length: 65
MERDAIIAHGMALFLKEKLVDTSDAYSTFVCDKCGLFAQRLFRKGNQSHTTSKDVYFCPSCKNYT