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scnpilot_p_inoc_scaffold_63737_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..515)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1223565 species="Bacteria; P similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 171.0
  • Bit_score: 295
  • Evalue 3.50e-77
Transcription-repair-coupling factor n=1 Tax=Rhizobium sp. Pop5 RepID=K0VRK7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 171.0
  • Bit_score: 295
  • Evalue 2.50e-77
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 171.0
  • Bit_score: 294
  • Evalue 2.10e-77

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Taxonomy

Rhizobium sp. Pop5 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGCGCAAGGCCAAGCTCAAGAAAAAGCTGCTGGATATGGCCGACGGCCTGATCCGCATCGCCGCCGAGCGCATGATGCGCCATGCGCCGGTGCTGACCGCGCCGGATGGGCTCTATGACGAATTCGCCGCCCGCTTCCCCTATGACGAGACGGACGACCAGGCGAACGCCATCGACGCCGTGCGCGAGGATCTCGGCGCCGGCCGGCCGATGGACCGCCTCGTCTGCGGCGACGTCGGCTTCGGCAAGACGGAAGTGGCGCTGCGCGCGGCTTTCGTCACGGCGATGGGCGGAAAGCAGACCGCGATCGTTGTGCCGACGACGCTGCTCGCCCGCCAGCATTTCAAAACCTTTTCGGAGCGCCTGCGTGGCTTCCCGATCCGCATCGCGCAGGCCTCGCGCCTCGTCGGCTCCAAGGAGTTGTCGCAGACCAAGAAGGAAGTGGCCGATGGCAAGGTGGATGTGGTGGTCGGCACCCATGCGCTGCTCGGCTCCGGCATCAACTTCGCCAAT
PROTEIN sequence
Length: 171
MRKAKLKKKLLDMADGLIRIAAERMMRHAPVLTAPDGLYDEFAARFPYDETDDQANAIDAVREDLGAGRPMDRLVCGDVGFGKTEVALRAAFVTAMGGKQTAIVVPTTLLARQHFKTFSERLRGFPIRIAQASRLVGSKELSQTKKEVADGKVDVVVGTHALLGSGINFAN