ggKbase home page

scnpilot_p_inoc_scaffold_64007_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 3..812

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Capnocytophaga cynodegmi RepID=UPI00037D5E49 similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 267.0
  • Bit_score: 269
  • Evalue 3.00e-69
Signal transduction histidine kinase Tax=GWB2_Bacteroidetes_41_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 270.0
  • Bit_score: 299
  • Evalue 3.80e-78
histidine kinase similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 268.0
  • Bit_score: 258
  • Evalue 2.00e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWB2_Bacteroidetes_41_8_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 810
CGTAAATTTAGAGAATTTGCAGAAAAATTAAGGAGTGCTGCTGAAAGCCTTGAAGAACTTGGTTTACTAAGAGTACTTGCAGGGCTGGGCCTAACAATTGGAGAATTTACACATGAAATAAAACAATATTTACCTGCTTTTGACGTGGACTCAGAATTCATTATTCAAAATTCACCAAATGATTCTGAAATAAAAAATAGAGGTATCAGATTAAAACAATCCTTCAATTCATTTAACACATATGCTTCTTATTTTGATGAAACAATATCACAAAATGTTCAGCGTGAATTAATAATTGTAGAATTAAGAGATGTAGTTAATCAATTTCTAAGTGTTATCATCCCGGATTTAGAAAGAGGGTCAATTAATATAACTAAATCTTTTAATGATCCAAGTTTATTTACTTGCAAAATGCATCCATCTGAATGGGCATCCATATTATTTAATCTATATAGTAATAGTAAAAAAGCAATCAAGAGAGCAAGATCTGAAGGGAAAATTAGTATAAATGCAGGTAAATTAGACAATATTGTATATTTAGAGTTCAGCGATAATGGTGATGGTGTACCAGATGAGAATGAAGAAAAAATATTTAATGCATTTTTCACTACATCAAGCCAAGTTGGACATAAGGGTACACAAAGAGAAGAATTAGCAGGCACAGGACTTGGATTAAAAATTATTAGTGATATTATTGGAGCTTATGGGGGGGAAATTTTTTTAACCCCTTCTAAAGATGGATTTAAAACTACATTTCGAATAGAAATTCCGGCCGCTACGGAAGATGAAATTGCAAAGTATGACATATAA
PROTEIN sequence
Length: 270
RKFREFAEKLRSAAESLEELGLLRVLAGLGLTIGEFTHEIKQYLPAFDVDSEFIIQNSPNDSEIKNRGIRLKQSFNSFNTYASYFDETISQNVQRELIIVELRDVVNQFLSVIIPDLERGSINITKSFNDPSLFTCKMHPSEWASILFNLYSNSKKAIKRARSEGKISINAGKLDNIVYLEFSDNGDGVPDENEEKIFNAFFTTSSQVGHKGTQREELAGTGLGLKIISDIIGAYGGEIFLTPSKDGFKTTFRIEIPAATEDEIAKYDI*