ggKbase home page

scnpilot_p_inoc_scaffold_64600_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 322..702

Top 3 Functional Annotations

Value Algorithm Source
Endoribonuclease L-PSP n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYB5_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 126.0
  • Bit_score: 201
  • Evalue 4.80e-49
endoribonuclease L-PSP similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 126.0
  • Bit_score: 201
  • Evalue 1.30e-49
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACU02382.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparin similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 126.0
  • Bit_score: 201
  • Evalue 6.60e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 381
ATGAAGAAAATTATCCATTCAACTAATGCTCCCGCTCCAATAGGGCCATATAGCCAAGCTGTAATAGCTAACGGTTTCTTATTTGCATCAGGTCAAATTGCAATTAACCCAGAAAGTAATGAGCTTAACATCGCTTCTTTAGAAGGAGAGACACATCAAGTAATGCGCAACATTAAAGCTCTGTTGGTAGAGTCGGAATATGGCTTCGAACATATTGTAAAAACCACCATATTTTTGTCGGACATGTCTTTATTTGCTGCTGTAAATGAAATCTATGGATCTTATTTCGAAAGCGACTTTCCTGCAAGAGAAACCGTAGCGGTTAAAGGCCTTCCTAAAGGTGTAAACGTAGAGATTTCTGTAACTGCATATAAAGGCTAG
PROTEIN sequence
Length: 127
MKKIIHSTNAPAPIGPYSQAVIANGFLFASGQIAINPESNELNIASLEGETHQVMRNIKALLVESEYGFEHIVKTTIFLSDMSLFAAVNEIYGSYFESDFPARETVAVKGLPKGVNVEISVTAYKG*