ggKbase home page

scnpilot_p_inoc_scaffold_64764_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 786..1115

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase III subunit RPC8 n=1 Tax=Mucor circinelloides f. circinelloides (strain 1006PhL) RepID=S2J304_MUCC1 similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 109.0
  • Bit_score: 116
  • Evalue 1.30e-23
DNA, scaffold: scf_mam1_v10141, strain NBRC 6742, whole genome shotgun sequence {ECO:0000313|EMBL:GAN06908.1}; TaxID=91626 species="Eukaryota; Fungi; Fungi incertae sedis; Early diverging fungal linea similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 109.0
  • Bit_score: 120
  • Evalue 1.30e-24
RPB7B; DNA-directed RNA polymerase II, 19 kDa polypeptide; K03022 DNA-directed RNA polymerase III subunit RPC8 similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 87.0
  • Bit_score: 113
  • Evalue 4.60e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mucor ambiguus → Mucor → Mucorales → Fungi

Sequences

DNA sequence
Length: 330
GTGGTATTTAAGCCCTTTGTTGGAGAAGTTTTGATTGGTAAAATTCGTAGTTGTACTGAGGAGGGTTTGAGTATCAGTTTAACCTTCTTTGATGACATTTTCATTCCAGCGCACTGCCTCCAACCGGGTACCACTTTTAACCCTTCTGAACGGCTTTGGGTGTGGAATTATGACGGAAATGAGCTGTTCATGGACTTGGAGGAGCCAATTCGTTTTCGCGTCCTGGTCCAATCCTTCACTGAAACCGCCCCGGTCCAGAAGGAGGCGTTGTTGGCGGCGGTGTCGAATAAAATGAACGGAATCGGTGAAATCGGGAAACAGGAAGAAGAA
PROTEIN sequence
Length: 110
VVFKPFVGEVLIGKIRSCTEEGLSISLTFFDDIFIPAHCLQPGTTFNPSERLWVWNYDGNELFMDLEEPIRFRVLVQSFTETAPVQKEALLAAVSNKMNGIGEIGKQEEE