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scnpilot_p_inoc_scaffold_66683_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 643..1089

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1263068 species="Bacteria; F similarity UNIPROT
DB: UniProtKB
  • Identity: 41.6
  • Coverage: 149.0
  • Bit_score: 128
  • Evalue 6.50e-27
mfd; Transcription-repair-coupling factor (EC:3.6.4.-) similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 150.0
  • Bit_score: 104
  • Evalue 2.00e-20
Transcription-repair-coupling factor n=1 Tax=Clostridium leptum CAG:27 RepID=R6P1H2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 41.6
  • Coverage: 149.0
  • Bit_score: 128
  • Evalue 4.60e-27

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Taxonomy

Clostridium leptum CAG:27 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 447
ATGGAATTTATCCGCGCTGCGCTGCGTGCAACCCCGGAGTTTGACACCCTGCTGTCTGCAGTCAGGCATGGTCGGACGCCTTTGTTGGCGTCGGGGCTTTCACGCATTCACAAAGCAAATATCATCAACACGCTCGGGGGGGTTCTCTCCAAACGGGCGGTTATTGTCATGCCCGATGAAGCCGAAGCCACCCGGCTGGCAGAAGATTTGGCAGCGCTGGGAACAGACGCTGTGTTTTTCCCTGCCCGGGACTTGGTTTTTCGACAGGTGGAAGGCGTGTCCCGGGAATACGAGCATCAGCGGATCGGTGTGCTGTGCAGGATGGTCACGGGAAGCTATGACGCCATCATCACCACCATTGATGCAGCCTCATTGTTCACCGTTCCCCGTGACCTATTGGCAGAGCGGTATTTCACCATCGCATCCGGCGATACCATCAAGCTCCAA
PROTEIN sequence
Length: 149
MEFIRAALRATPEFDTLLSAVRHGRTPLLASGLSRIHKANIINTLGGVLSKRAVIVMPDEAEATRLAEDLAALGTDAVFFPARDLVFRQVEGVSREYEHQRIGVLCRMVTGSYDAIITTIDAASLFTVPRDLLAERYFTIASGDTIKLQ