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scnpilot_p_inoc_scaffold_66867_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 172..651

Top 3 Functional Annotations

Value Algorithm Source
CopG family transcripitonal regulator n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030505AE similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 159.0
  • Bit_score: 304
  • Evalue 8.60e-80
  • rbh
DNA-binding CopG-like protein {ECO:0000313|EMBL:EYR84293.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 159.0
  • Bit_score: 300
  • Evalue 1.30e-78
CopG family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 158.0
  • Bit_score: 209
  • Evalue 8.10e-52

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGGCAACCAGAACCCGCCTGAATCTCTATTTCGACCCCGCGCTCATTCCGCAGATCGAGGCGATGGCGCTGCGCCGCTCGGTGGCGCTACGCCGCAATGTCTCAAAATCCGCAATCGTGGAGGCGGCGGTCATGTCCTATCTGTCCGGCGATGCCGACGACCAGCTTGAAGCCGCCATGTCTCGCCGCTTGGATAAACTCGGCCGCCAGATCGACACGCTCGACCTAGATCTCGCCGTCCTCGGCGAGACGGTCGCGCAGTTCATCCATTTCTGGATGACCATCACGCCGCCGCTTACGGGAGCCGCACAATCCGCTGCCCGCGCCAAAGGCGCGGAGCGGTTCGAGGGCTTCATGCAGAATCTCGGCCGGCGTCTGGCGACGGGTGACAGGTTCCTCAAAGAGCTGTCGCGTGACCTCGACTCACTTCCCGACGATCCGGTGCCAGACGAGGCACAAACCAACGGCGATCAAGAGTAA
PROTEIN sequence
Length: 160
MATRTRLNLYFDPALIPQIEAMALRRSVALRRNVSKSAIVEAAVMSYLSGDADDQLEAAMSRRLDKLGRQIDTLDLDLAVLGETVAQFIHFWMTITPPLTGAAQSAARAKGAERFEGFMQNLGRRLATGDRFLKELSRDLDSLPDDPVPDEAQTNGDQE*