ggKbase home page

scnpilot_p_inoc_scaffold_68371_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2..1069)

Top 3 Functional Annotations

Value Algorithm Source
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD sub similarity UNIPROT
DB: UniProtKB
  • Identity: 39.4
  • Coverage: 358.0
  • Bit_score: 273
  • Evalue 5.10e-70
Exodeoxyribonuclease V, gamma subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDT3_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 39.4
  • Coverage: 358.0
  • Bit_score: 273
  • Evalue 3.60e-70
exodeoxyribonuclease V subunit gamma similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 358.0
  • Bit_score: 273
  • Evalue 1.00e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1068
AAAAGCATTTTCCTGGCTAAGGTAAAAGGCAAAAATGTGCATCACCTCAACCAGGGTAATGATCTTTTAACCAGCTGGGGAACGGTAGTGCAGAATACGTTTAAAATGCTCTTCCGCACAGAGGAGTTCATCAATGCCTTACAAGACCTGCCCAGCGTATTGCCTGATGCGACAAGCTTACTGGGGCAGATACAACAAGACATCTACTATAACCGGGTAGTGCCAGAAGGCTTTAGTAAAGCCCAACTGGAAGATGGTACGATAAGTGTACAGGAACATTACTCCATGCGCCGGGAAGTAGAAGGGGTCTATAACTATATCATGGATGCAGTGCAGCAGCAAAAGTTTGGAAAGCTTACCGAGCGTGATATCATCGTTATGGTAACCGACATCAATGCTTATGCGCCTTTCATCCGTGCGGTAATGGACAATGCTCCTTATAAATTCCAGTACAGTATTGCCGATGAGCATATCTCCAATGGGGATACGGTCATCAGTACTTTTATCGCCCTGCTGGAACTTAACGGCAGCCTTTTCAGCGCAGAATCGGTCTTGCAATTACTCAACTCAAAATACATCCGCCAAAAGTTCGGCATCCATAATGTATCGTTGATCAGGAATCTTGTACTGAAAGCAAACATCCGCTTCGGTATTGAAAATGATTATCAAAAAAATACGGATGATACTTATCTCGTAAGCTGGAAATATGGCCTGCAAAAGCTTATGTACGGCCTGTGTATGGACACGGAGGAGCAACTGAATTTCGGCAAACCTTTCTACCCGGTTGCCGCTGCAGATAATATTGCTGATATGCAGCAGATCATTGCACTCACGGCTTTCATAGAAGCCTTAAGCAGGATGCTGCAAGCCAGGAGTGGCGAAAAAACATTGAAAGAATGGAAAGAATATGTGGAACAGATCTTGTCCACCTTTATCTATGAAGAGGAGCAGGAAAAAGATGAAGAGCATGCAAAGATCATCAATAACCTGAACCAGAACGACCTGGTGGAATTACACACTGCAGGTTTAAAGATCAGCTACGAGGTCATCAGCCAGCGCTTCATCAAT
PROTEIN sequence
Length: 356
KSIFLAKVKGKNVHHLNQGNDLLTSWGTVVQNTFKMLFRTEEFINALQDLPSVLPDATSLLGQIQQDIYYNRVVPEGFSKAQLEDGTISVQEHYSMRREVEGVYNYIMDAVQQQKFGKLTERDIIVMVTDINAYAPFIRAVMDNAPYKFQYSIADEHISNGDTVISTFIALLELNGSLFSAESVLQLLNSKYIRQKFGIHNVSLIRNLVLKANIRFGIENDYQKNTDDTYLVSWKYGLQKLMYGLCMDTEEQLNFGKPFYPVAAADNIADMQQIIALTAFIEALSRMLQARSGEKTLKEWKEYVEQILSTFIYEEEQEKDEEHAKIINNLNQNDLVELHTAGLKISYEVISQRFIN