ggKbase home page

scnpilot_p_inoc_scaffold_68504_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..860)

Top 3 Functional Annotations

Value Algorithm Source
LysR family regulatory helix-turn-helix protein 20 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T1E3_ALCXX similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 286.0
  • Bit_score: 334
  • Evalue 1.10e-88
  • rbh
LysR family regulatory helix-turn-helix protein 20 {ECO:0000313|EMBL:EGP45811.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 286.0
  • Bit_score: 334
  • Evalue 1.50e-88
Transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 286.0
  • Bit_score: 331
  • Evalue 2.50e-88
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Achromobacter insuavis → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGACGGAACTATTTTCCATCAATCATTACCGCTACTTCGTCTACGTGGCGGACACCGGCAGCTTCCGCCTGGCGGCCGAACGAGCCTGCCGCTCCCAGCCGGCTATCTCCCTGGCAATCCGTGAAATGGAAGAGCGGCTGGGACAACCGCTCTTCATCCGCGGAAGCCCGGTCAGGCTCAGCACCTTTGGCCAGTCCTGTATTACGCTGGCCAAGCAACTGGTGGCGCATGCGGACCTGGTGGCGGGCACCATGGGCCGCATGGCGCGCAGCGACACCGGCTACCTGAGCATTGCCAGCGTCATGTCGGTTGCCACGCACTGGATGCCCGGCCTGCTGCAAGCCTATCGCCGCCTATATCCCAATGTGATGCTCAACGTGCATGACGACAACTCCGAAGGCGTCGAGCAGATGCTGCTCAATGGGCAGGTCGAACTGGGCCTGTGCAGCGTGGTCAGCCAGGACCCAGCCCTGACGTTCCAGCCGCTGTACGAAGACGAGTTCGGGCTGGTCTGCCACCGCAGCCATCCCGCCGCCCTCAGAAAATCGCTGACATGGAAAGAAATCGAATCCTTGCCGCTCATCGGAACCGTCGCGCACAAGCAGCTGCGCGACTGGCCGGAGGCGGCGGTCCTGCGCGACCGGCCCCTGTTCATCGCCAACATGCTGACCCTGATCGCCATGCTGCGCCGCAATCTGGGTGTGACCGTACTGGCCCGCCTTGGTGTGCCGCCGGGGCAGGATGACCTAGTGTTCGTCCCGCTGGTCGAGCCGGTCATCCGGCGCACGCTGGGCCTGCGGACCAGGGCGGGCGCCGTGCTGTCGCCTTCGGGCGCCCGCATGGCGGCGTTGCTGGAG
PROTEIN sequence
Length: 286
MTELFSINHYRYFVYVADTGSFRLAAERACRSQPAISLAIREMEERLGQPLFIRGSPVRLSTFGQSCITLAKQLVAHADLVAGTMGRMARSDTGYLSIASVMSVATHWMPGLLQAYRRLYPNVMLNVHDDNSEGVEQMLLNGQVELGLCSVVSQDPALTFQPLYEDEFGLVCHRSHPAALRKSLTWKEIESLPLIGTVAHKQLRDWPEAAVLRDRPLFIANMLTLIAMLRRNLGVTVLARLGVPPGQDDLVFVPLVEPVIRRTLGLRTRAGAVLSPSGARMAALLE