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scnpilot_p_inoc_scaffold_70952_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(60..821)

Top 3 Functional Annotations

Value Algorithm Source
LytTR family two component transcriptional regulator n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CKR3_ELIME similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 254.0
  • Bit_score: 314
  • Evalue 1.30e-82
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:KGE13324.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingob similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 251.0
  • Bit_score: 320
  • Evalue 2.00e-84
DNA-binding response regulator similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 254.0
  • Bit_score: 306
  • Evalue 5.90e-81

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Taxonomy

Sphingobacterium sp. ACCC 05744 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 762
ATGAATATAACCAAAGTATTAATCATCGAGGACGAAAAACTCAATGCCGATCGTTTAAAGCGACTTTTGAAAGAAATAAAACCATCCATCGTTATTTTGGATGTACTTGATAATATTGCGGATAGCATCAATTGGTTCAATAGCAATGAACTTCCCCACCTGGTCATGATGGATATTCGTTTATCCGATGGCTTAAGCTTTGAAATATTAGAGACTATAAAAATAGACTGCCCAATCATATTTACAACAGCATTTGACGAATACGCTGTGAGGGCTTTTAAATTCAATAGCATAGATTATTTGCTCAAACCTGTAGAAAAAATAGAGCTGGGAAATGCCATCCAAAAACTTGACTATCAAAAAGATCTCCAGATCAACCAACAACCGCTTCAAGGTTTATTGGATTTTATCTATCCAAAAGATTTTCGCTCACGTTTTCTAATTCCATTCAAAGACGGTTATAAGACCATTCTCGTCGAAGAAATATTATACTTTTACTCCGAATTTAAACTTACCCATGCGCAACTCAAATGTGGTACTGTCGAAATTGTCCCTCAAACAATGGAAGAACTCGAACAGCAATTGAATCCAAAAGTATTTTTTCGCGCCAACAGGCAATTCATTGTACATATAGATGCGATCAAAAGATTACATAACCACTTCAACGGAAAACTAAAAATAGAAATTAAAAATAACGATCAAGTGGAAATCCTTGTGAGCAGAGAAAAGGCTCAACTGCTAAAAAATTGGTTAGACTATTAA
PROTEIN sequence
Length: 254
MNITKVLIIEDEKLNADRLKRLLKEIKPSIVILDVLDNIADSINWFNSNELPHLVMMDIRLSDGLSFEILETIKIDCPIIFTTAFDEYAVRAFKFNSIDYLLKPVEKIELGNAIQKLDYQKDLQINQQPLQGLLDFIYPKDFRSRFLIPFKDGYKTILVEEILYFYSEFKLTHAQLKCGTVEIVPQTMEELEQQLNPKVFFRANRQFIVHIDAIKRLHNHFNGKLKIEIKNNDQVEILVSREKAQLLKNWLDY*