ggKbase home page

scnpilot_p_inoc_scaffold_71007_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(337..1038)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, permease protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JQB4_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 232.0
  • Bit_score: 225
  • Evalue 5.70e-56
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 232.0
  • Bit_score: 225
  • Evalue 1.60e-56
ABC transporter, permease protein {ECO:0000313|EMBL:ACM31333.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobact similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 232.0
  • Bit_score: 225
  • Evalue 8.00e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATCTGGTGGTTCGCCTCGGAGGGGAACACCAATCCGTTCTTCCCGCCGCTGTCGAAGATCTGGGACTCCTTCGTCACCGAGATGAGCAGCGGGCAGATGGAGCTGCATCTCTGGGCCAGCACGCGCAACATCCTGATCGGCCTCGCCGTCGGCGTGGTCGTGGGCGTGGTCGGCGGGACCGTGATCGGTCTCTCGCGTCGGCTGCGAGCGGTGCTCAACCCCTACCTGCAGTTCTTCCGCACGCTGCCGCAGGTCGCGATCATCCCCATCATCATCGGCGCCTTCGGGATCACGGCGGTGCCGAAGATCTGGGCGATCGGGTTCGCCTGCATCTGGCCGGTGCTGCTCAACACGGTCGACGGCATCCGTGCGATCGATCCGGGCGTGCGGGACATGGTCGACGCCTACCGGATCACGACCTGGCGCTCGATCTTCCGGGTCGTGCTGCCCGGCGCGCTGCCCCAGATCATGGCCGGGATCCGCATCTCGCTCTCGGTAGCGGTCGTGCTCATGGTCGTGTCGGAGATCTACGCGGCGACCGAGGGCGTCGGCTACTTCATCCACATCACCACCGGGCTCTTCCAGACCGACAAGACCTGGATGGGCACGCTGCTGGTCGGCCTGATGGGCTACCTGCTCAGCGTCATCTTCCTGCTGATCGAGAAGCGCGCACTGCGCTGGTACCACGAGTCGGCCAGCTGA
PROTEIN sequence
Length: 234
IWWFASEGNTNPFFPPLSKIWDSFVTEMSSGQMELHLWASTRNILIGLAVGVVVGVVGGTVIGLSRRLRAVLNPYLQFFRTLPQVAIIPIIIGAFGITAVPKIWAIGFACIWPVLLNTVDGIRAIDPGVRDMVDAYRITTWRSIFRVVLPGALPQIMAGIRISLSVAVVLMVVSEIYAATEGVGYFIHITTGLFQTDKTWMGTLLVGLMGYLLSVIFLLIEKRALRWYHESAS*