ggKbase home page

scnpilot_p_inoc_scaffold_67187_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(465..1085)

Top 3 Functional Annotations

Value Algorithm Source
DNA, insertion sequence IS1422 (Fragment) n=1 Tax=Ralstonia solanacearum RepID=Q9KW15_RALSL similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 109.0
  • Bit_score: 187
  • Evalue 1.20e-44
DNA, insertion sequence IS1422 {ECO:0000313|EMBL:BAA97980.1}; Flags: Fragment;; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 109.0
  • Bit_score: 187
  • Evalue 1.60e-44
ISSpo7, transposase similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 102.0
  • Bit_score: 165
  • Evalue 1.70e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ralstonia solanacearum → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
AGAGCGCAAGACCATCATGATCGACGCGACCTATCTCAAGGCCCACCGCACGGCTTCCAGCCTGCGGGTAAAAAAGGGGGCTCAGGCCGCCTGATTGGGCGCACGAAAGGCGGCATGAACACCAAGCTTCATGCCGTAACGTATGCGAATGGTCGCCCGATCAGTTTCTTCATAACGGCCGGTCAGGTCAGCGATTACACCGGTGCCGCCGCCTTGCTTGATGAACTTCCCAAGGCCAAATGGCTACTGGCCGACCGTGGCTATGATGCCGACTGGTATCGTGACGCTTTACAGGCAAAGGGGATTACCTCTGCATTTCGGGTCGGAAGTCCCGCAACAAAGCCATCAAATACGATAAACGCCGGTACAAACGGCGCAACCGGATCGAGATCATGTTCGGGCGTCTCAAAGACTGGCGGCGTGTCGCTACCCGCTACGACAGATGCCCAATGGTCTTCCTCTCCGCCATCGCTCTCGCGGCAACCGTTATCTTCTGGCTCTGATCAACGAGTCCTGAACCTAACGGGCGATCACCGAATAAGGACTGCGCGGAAATCATTCACATTTGTGCCGGTTGGTCCAGTCTTATGGAGATCACCGATGATGGAGAATGCCGTATAG
PROTEIN sequence
Length: 207
RAQDHHDRRDLSQGPPHGFQPAGKKGGSGRLIGRTKGGMNTKLHAVTYANGRPISFFITAGQVSDYTGAAALLDELPKAKWLLADRGYDADWYRDALQAKGITSAFRVGSPATKPSNTINAGTNGATGSRSCSGVSKTGGVSLPATTDAQWSSSPPSLSRQPLSSGSDQRVLNLTGDHRIRTARKSFTFVPVGPVLWRSPMMENAV*