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scnpilot_p_inoc_scaffold_67472_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(689..1081)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=1 Tax=Thiobacillus denitrificans RepID=UPI00036F16A9 similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 130.0
  • Bit_score: 253
  • Evalue 1.40e-64
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 96.9
  • Coverage: 130.0
  • Bit_score: 252
  • Evalue 6.80e-65
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 130.0
  • Bit_score: 252
  • Evalue 3.40e-64

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
AGCGCCTTTTACACCTGGCTGTATCGCATCGCCGTGAACACCGCCAAGAACTATCTGGTGGCGCACAAACGCCAGCCGGTGTCGAGCGATGTGCTGGCCGAAGATGCGGAGAACTACGAGGAAGGCGATCTGTTGCGCGACATCGCGACGCCGGACGCGGAACTCCAGACCAAACAGATCGCCAAAGCAGTCAATGAGGCGGTCGATGCGCTGCCCGAGGAATTGCGGACAGCCATCACGCTGCGCGAAATCGAAGGCATGAGCTACGAGGATATCGCGCAGATGATGGAATGCCCGATCGGCACGGTGCGCTCCCGGATTTTCCGGGCGCGCGAGGCCATTGCCGAAAAAATACGCCCGATGCTGGGCACCAGTCAGGATAAAAGGTGGTAA
PROTEIN sequence
Length: 131
SAFYTWLYRIAVNTAKNYLVAHKRQPVSSDVLAEDAENYEEGDLLRDIATPDAELQTKQIAKAVNEAVDALPEELRTAITLREIEGMSYEDIAQMMECPIGTVRSRIFRAREAIAEKIRPMLGTSQDKRW*