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scnpilot_p_inoc_scaffold_64868_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(720..1115)

Top 3 Functional Annotations

Value Algorithm Source
Similar to Uncharacterized RNA-binding protein C22E12.02 acc. no. Q10355 n=1 Tax=Pyronema omphalodes (strain CBS 100304) RepID=U4LMR1_PYROM similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 130.0
  • Bit_score: 129
  • Evalue 3.10e-27
Similar to Uncharacterized RNA-binding protein C22E12.02 acc. no. Q10355 {ECO:0000313|EMBL:CCX30630.1}; TaxID=1076935 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Pezizomycetes; Pez similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 130.0
  • Bit_score: 129
  • Evalue 4.40e-27
rbpA; RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 76.0
  • Bit_score: 62
  • Evalue 1.00e-07

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Taxonomy

Pyronema omphalodes → Pyronema → Pezizales → Pezizomycetes → Ascomycota → Fungi

Sequences

DNA sequence
Length: 396
AAACCACTTATTGTTGAGACTGTGCTAGTGGCCAAACCGGTCTCTAAACCGGCCAAGCCTGCAGTGAATCCGGCCATTGTTCGTCAAGGAGGCGGCAAGGTTTGGCAAGACCAAAGCTTGATGGACTGGGACCTGAATCATTTTTTACTTTTTGTCGGTAATTTGGGACCCGAAGTGAGTGAACAGTTATTGCAGCAAACTTTCAGTAATCCTTTCCCGTCGGTTAGTCGGGTACGAATTGTGAAGGACAAGAAGACGGACGAGTCGAAGGGTTACGGATTTGTTGCTTTTGCGGATGGAAAAGAATTTTTGAAAGCCTTGAAAGAGATGCAGGGGAGATGGATTGGAAATCGACAAGTTCAAATTAAAAAATCCGATTTTAATAAAAAATCTTGA
PROTEIN sequence
Length: 132
KPLIVETVLVAKPVSKPAKPAVNPAIVRQGGGKVWQDQSLMDWDLNHFLLFVGNLGPEVSEQLLQQTFSNPFPSVSRVRIVKDKKTDESKGYGFVAFADGKEFLKALKEMQGRWIGNRQVQIKKSDFNKKS*