ggKbase home page

scnpilot_p_inoc_scaffold_139264_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(14..568)

Top 3 Functional Annotations

Value Algorithm Source
Putative IS630 family transposase OrfB n=2 Tax=Rhizobium RepID=L0LPX8_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 184.0
  • Bit_score: 364
  • Evalue 6.20e-98
  • rbh
putative IS630 family transposase OrfB similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 184.0
  • Bit_score: 363
  • Evalue 5.10e-98
  • rbh
Putative IS630 family transposase OrfB {ECO:0000313|EMBL:ENN88284.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 184.0
  • Bit_score: 363
  • Evalue 2.50e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
GTGGCAGAGATTGCGAGCGGAGCGGCCCGAGGAAGACGCATAGAAATTTGGTACCAAGATGAGGCTCGGATTGGTCAAAAGAACAAAATCACACGTCGCTGGGCAAAGCGGGGCTCAAGGCCATCCGCCCCACACGACCAGCGAACCCGCTCTGCCTACATCTTCGGTGCCATCTGCCCCAAGCTGGGCAAGGCGGCGGCACTGATCATGCCGTGGTGTGATACCCACGCCATGACCCAGCACTTGGCTGAAATCTCTCGGCACGTGGCCAATGACGCGCATGCCATCCTCATCATGGACCAGGCCGGCTGGCACATGTCCAACGCACTCGTTGTGCCCGCCAACATAACGATCCTGCCGCTGCCGCCGAAATCGCCGGAGCTCAATCCGGTCGAAAATCTCTGGCACTTCATGCGCGAGAACTGGCTGTCGAACCGCGTCTTCAAATCTTACGACGATATCGTCGCCCATTGCTGCGACGCATGGCGCAAACTCGAAAGCCAGCCATGGCGGATCATGTCTATCGGACGCAGACAATGGGCCAATGGGTTCTGA
PROTEIN sequence
Length: 185
VAEIASGAARGRRIEIWYQDEARIGQKNKITRRWAKRGSRPSAPHDQRTRSAYIFGAICPKLGKAAALIMPWCDTHAMTQHLAEISRHVANDAHAILIMDQAGWHMSNALVVPANITILPLPPKSPELNPVENLWHFMRENWLSNRVFKSYDDIVAHCCDAWRKLESQPWRIMSIGRRQWANGF*