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scnpilot_p_inoc_scaffold_74565_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(498..998)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbJ n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UNM4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 166.0
  • Bit_score: 280
  • Evalue 1.40e-72
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:CDN94541.1}; Flags: Precursor;; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agroba similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 166.0
  • Bit_score: 313
  • Evalue 1.60e-82
P-type conjugative transfer protein TrbJ similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 167.0
  • Bit_score: 269
  • Evalue 9.00e-70

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
ACGCTTCAGCAGAATGTTCAGAAGACCCAGCAGCTCCTGAAGCAGGCGCAGAACATCGCCTTCGACGTGCAGAACATCGACCAGATGTTCCAGCAGCAATACGGCACCGTCTCGATGTCGGCGAGCGATCAGCAGCTCGTCAGCGCCGCGCGCAGCCGCTGGCAGAACACCGTCGGAAGCCTGCAGGACGCGATGCGCGTCCAGGCAGGCGTCGTCGGTAACATCGACACCAACCGCACGCAGATGAGCGAACTGGTGAACCAGAGCCAGGGCGCGACCGGCGCGCTTCAGGCGACTCAGGCCGGCAACCAGCTCCTCGCCCTCCAGTCGCAGCAGCTCTCCGATCTCGTCGCGCTGCTCGCAGCCAACGGCCGTTCGGGCGCGCTGACGGAGGCCGAGCGCTCCGCAGCAGCCGAGCAGGGGCGTGAGCAGCGCCGCCGCTTCCTGACGCCCGGTTCCGGCTATCAGGCCGGCAGCGCGCGGATGTTCAACGGCAATTGA
PROTEIN sequence
Length: 167
TLQQNVQKTQQLLKQAQNIAFDVQNIDQMFQQQYGTVSMSASDQQLVSAARSRWQNTVGSLQDAMRVQAGVVGNIDTNRTQMSELVNQSQGATGALQATQAGNQLLALQSQQLSDLVALLAANGRSGALTEAERSAAAEQGREQRRRFLTPGSGYQAGSARMFNGN*