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scnpilot_p_inoc_scaffold_74586_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2..1000)

Top 3 Functional Annotations

Value Algorithm Source
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1) similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 333.0
  • Bit_score: 634
  • Evalue 1.60e-179
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hyd similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 333.0
  • Bit_score: 634
  • Evalue 8.10e-179
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=2 Tax=Rhizobium RepID=U4Q0U5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 333.0
  • Bit_score: 634
  • Evalue 5.80e-179
  • rbh

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
GCCGGCTCCGAGATCGTGCGCATCACCGTCGACCGCGACGAAAGTGCCGCCGCCGTGCCGAAAATCCGCGAGCGGCTGCTGCGGCTAGGGCTGGACGTGCCACTGGTCGGCGATTTTCATTATATCGGCCACAAGCTGCTTGCCGATCACCCGGCCTGCGCCGAGGCGCTGGCGAAGTACCGCATCAATCCCGGCAATGTCGGCTTCAAGGACAAGAAGGACAAGCAGTTTGGCGATATCGTCGAAATGGCGATCCGCCATGACAAACCGGTGCGCATCGGCGTCAACTGGGGCTCGCTCGACCAGGAACTGCTGACCGCGCTGATGGACCGCAACAAGGCGGAGGGCTTCCCGCTCTCGGCCCGGCAGGTGACGCGCGAGGCGATCGTGCAATCGGCGCTAATCTCGGCCAATCTCGCGGAAGAAATCGGCCTGGCGCGCAATCGCATCATCCTCTCGGCCAAGGTCAGCCAGGTGCAGGACCTGATCGCCGTCTATTCGATGCTGGCGGAGCGCTCCGACCACGCCCTGCATCTCGGCCTCACCGAGGCCGGCATGGGTTCCAAGGGCATCGTCGCGTCGTCGGCCGCCATGGGCTACGTGCTGCAGCACGGCATCGGCGATACGATCCGCGTGTCCCTGACGCCGGAGCCGAACGGCGACCGCACCCGTGAGGTGCAGGTGGCGCAGGAACTGCTGCAGGTCATGGGTTTCCGCCAGTTCGTGCCGGTCGTCGCCGCCTGTCCGGGCTGCGGGCGCACCACGTCCACTGTCTTCCAGGAACTTGCTCAGAACATCCAGAACGACCTGCGCAAGAACATGCCGGTCTGGCGCGACAAATATCCGGGCGTCGAGGCGCGGAACGTCGCGGTCATGGGCTGCATCGTCAACGGTCCCGGCGAAAGCAAGCATGCCGATATCGGCATGTCGCTGCCCGGTACCGGCGAATCGCCCGCCGCCCCCGTCTTCATCGACGGCCAGAAGGCGATGACGCTGCGC
PROTEIN sequence
Length: 333
AGSEIVRITVDRDESAAAVPKIRERLLRLGLDVPLVGDFHYIGHKLLADHPACAEALAKYRINPGNVGFKDKKDKQFGDIVEMAIRHDKPVRIGVNWGSLDQELLTALMDRNKAEGFPLSARQVTREAIVQSALISANLAEEIGLARNRIILSAKVSQVQDLIAVYSMLAERSDHALHLGLTEAGMGSKGIVASSAAMGYVLQHGIGDTIRVSLTPEPNGDRTREVQVAQELLQVMGFRQFVPVVAACPGCGRTTSTVFQELAQNIQNDLRKNMPVWRDKYPGVEARNVAVMGCIVNGPGESKHADIGMSLPGTGESPAAPVFIDGQKAMTLR