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scnpilot_p_inoc_scaffold_78611_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(979..1314)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoS n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E4213 similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 111.0
  • Bit_score: 217
  • Evalue 7.40e-54
RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 111.0
  • Bit_score: 213
  • Evalue 1.90e-52
RNA polymerase sigma factor RpoS similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 111.0
  • Bit_score: 210
  • Evalue 2.50e-52

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
AGAGTGGCATCGCTCGATGCGCCGCTCGAGGTCGACCCCACGCTGTCGCTGGGCGAAACGATCGCCGACGACAATGTCCATCTGCCGGACGAAATGCTGCAGGTCGAGGAAATCGAACACCATGTCCGCGAATGGCTGACCCAGCTCAACGACAAGCAGCGCTGGGTGATCGAGCGGCGCTTCGGCCTGAACGGCTGTGAAGCCTGCACGCTGGAAGACCTGGCGCTCGAACTGCAGGTGACGCGCGAGCGTGTGCGCCAGATCCAGATGGAATCCCTGCGCGTGCTTCGGCAGCTGCTGCGGCGGCGCGGCGTGTCCAAGGACGAACTGTTTTAA
PROTEIN sequence
Length: 112
RVASLDAPLEVDPTLSLGETIADDNVHLPDEMLQVEEIEHHVREWLTQLNDKQRWVIERRFGLNGCEACTLEDLALELQVTRERVRQIQMESLRVLRQLLRRRGVSKDELF*