ggKbase home page

scnpilot_p_inoc_scaffold_80838_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(618..1418)

Top 3 Functional Annotations

Value Algorithm Source
FMN-binding negative transcriptional regulator n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y0A9_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 161.0
  • Bit_score: 253
  • Evalue 2.90e-64
FMN-binding negative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 161.0
  • Bit_score: 253
  • Evalue 8.20e-65
FMN-binding negative transcriptional regulator {ECO:0000313|EMBL:ACB36588.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix chol similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 161.0
  • Bit_score: 253
  • Evalue 4.10e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
ATGTACGTCAGAAAACAACACCAGTGGACGGACCGCGAAGAGGTCTTTGCGCTGATCGAGGCGCATGCGCTGGGCGCCTGGGTGTGCCAGGCGGAGGGCGGGCTCATCGCCAACCATGTGCCCTTCGTGCTGGACCGTGGCCGGGGTGAGCACGGCACGTTGATGTGCCATGTGTCGCGCGCCAACCCGGTGTGGCGCGCGCTCGGTGCGGGCGTGCCGTCGGTGGTGATGTTTCGGGGGCCGCAGGCCTACATCACGCCAGGCTGGTACCCGGGCAAGGCGGAGCACGGCAAGGTGGTGCCCACCTGGAACTACCTGGCCGTGAACGCGCATGGCATGGCGCGGGTGGTGGACGACCCGGCCTGGCTGCTGGGCCTGCTCAATCGCCTGACCCAGACGCACGAGGCCGGGCGCCCGCAGCCCTGGCAGGTGGGCGATGCCCCGGCGGACTACATCGACAAGCAGTTGCGTGCCATCGTTGGCGGGCCTGCGTGCGGAGCAGCGCGAGGCCTCCGCCGCGATGGCCGATTGGGTGCAGCGGGCCATGGAGGGCACTGGGCCCGGCGGCGCGTGAAGGGCGCCCGCCAACGGCCAGGCCGCCGCCGTCAGATCGCGTCGAGGAACTCCCGCAGCGCCGGGCCCGGCTCGCCATTCCACACGAGGTGCGTGCGGTTGTGGCGGAGCGGCTCGGGCAGCGGGTGCTGGCGGATGTCTTTCGAGGCGTGCAGGGCGCCCAGCAGCGAGGCGGGCACGATGCCGCAGCCGGTGCCGGCGGCCGCGCAGGCAATGATGGCCTGGTAG
PROTEIN sequence
Length: 267
MYVRKQHQWTDREEVFALIEAHALGAWVCQAEGGLIANHVPFVLDRGRGEHGTLMCHVSRANPVWRALGAGVPSVVMFRGPQAYITPGWYPGKAEHGKVVPTWNYLAVNAHGMARVVDDPAWLLGLLNRLTQTHEAGRPQPWQVGDAPADYIDKQLRAIVGGPACGAARGLRRDGRLGAAGHGGHWARRRVKGARQRPGRRRQIASRNSRSAGPGSPFHTRCVRLWRSGSGSGCWRMSFEACRAPSSEAGTMPQPVPAAAQAMMAW*