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scnpilot_p_inoc_scaffold_82468_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2080..2538)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Thiobacillus thioparus RepID=UPI00037367BF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 148.0
  • Bit_score: 290
  • Evalue 1.20e-75
carbamoyl-phosphate synthase L chain, ATP-binding similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 148.0
  • Bit_score: 290
  • Evalue 3.40e-76
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; H similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 148.0
  • Bit_score: 290
  • Evalue 1.70e-75

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
CTTTCCAAGGTGCAATACGAGGTCAAGGCACACCAGGAAGCCCTGATCGCGATGCAGGATCGTGTCGGTCTGCCGATCAAGAACCTGAAGGACATCAACAAGCAGATGTCGACCGGCGAGGCCAAGGCACGCCGCGCCAAGCGCGAGATGATCGAGGCCAACCTGCGCCTGGTCATCTCGATCGCCAAGAAATACACCAACCGCGGCCTGCAGTTCCTCGACCTGATCCAGGAAGGCAACATCGGTCTGATGAAGGCGGTCGACAAGTTCGAATACCGTCGCGGCTACAAGTTCTCGACCTATGCGACCTGGTGGATCCGTCAGGCGATCACGCGTTCGATCGCCGACCAGGCGCGCACCATCCGCATCCCGGTGCACATGATCGAAACCATCAACAAGATGAACCGGATCAGCCGCCAGATCCTGCAGGAAACCGGCATCGAGTGCTGGACAGCCTGA
PROTEIN sequence
Length: 153
LSKVQYEVKAHQEALIAMQDRVGLPIKNLKDINKQMSTGEAKARRAKREMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQETGIECWTA*