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scnpilot_p_inoc_scaffold_66488_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(309..644)

Top 3 Functional Annotations

Value Algorithm Source
HopJ type III effector protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SDR6_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 107.0
  • Bit_score: 132
  • Evalue 3.10e-28
HopJ type III effector protein similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 107.0
  • Bit_score: 132
  • Evalue 8.80e-29
HopJ type III effector protein {ECO:0000313|EMBL:ADY51812.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseu similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 107.0
  • Bit_score: 132
  • Evalue 4.40e-28

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Taxonomy

Pseudopedobacter saltans → Pseudopedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 336
ATGACTACAACAGAATTATTGAATAAATCAAAAGGAAGCGAATTACAGTTTCAGGAAGTATTGGCGCATATTGCCGATCAGTACAGCTATAGTCCCAGTGCATTTCAAAATGGGACGCTGAAAAATTCGAAAGAAGAAAATCAAGGTAGTGCAAAAGTTTTCTATTTTGCACAGTTAAATAATCTTTCGCAGGAGGATACATTGCGCCTTTTTGCCGAACATTATCAAAATGTACTCGATAATCCAGACGGAGATGGCCATCAGAACATTCGTCAATTTAGGACAAATGGTTGGGATGGGATCCTGTTTGAGGAAGAAGTACTGGTGAAACAATAA
PROTEIN sequence
Length: 112
MTTTELLNKSKGSELQFQEVLAHIADQYSYSPSAFQNGTLKNSKEENQGSAKVFYFAQLNNLSQEDTLRLFAEHYQNVLDNPDGDGHQNIRQFRTNGWDGILFEEEVLVKQ*