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scnpilot_p_inoc_scaffold_69866_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 3..911

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RBG_13_Chloroflexi_54_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 284.0
  • Bit_score: 334
  • Evalue 2.10e-88
DNA-directed RNA polymerase subunit beta' n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=RPOC_ROSCS similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 270.0
  • Bit_score: 329
  • Evalue 3.60e-87
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 270.0
  • Bit_score: 329
  • Evalue 1.00e-87

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Taxonomy

RBG_13_Chloroflexi_54_9_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 909
CTCTACGGTTCCGCCGCGACTGCGGTTGTGGCCGACCGGATGAAACGGTTGGGCTTCAAGTATTCGACCAAGGGCGGTATCAGTATCGCCGTTTCCGACGTGGAAATCCCGACCGGCAAGCAGAGCTTGCTAGAAGAAGCTGACCGGAAGGTTATCCAGATTGAGCGGCAGTACAAGCGCGGTCTTTTGACCGAAGCCGAGCGCTACCGCCAGACCATCGACACCTGGGAAGAAACCAGGGCCGCCGTTTCGGACCAGGTGAAGGACAGCCTCAACCCGTTTGGTTCGCTTTCGATGATGACCACCTCCGGCGCGAAAGGTAACATCAAGCAGATCAGCCAGATGAGTGGTATGCGCGGTCTGATGGCCGACCCGTCCGGTCGCGTTATCGAACTGCCTATTCGCTCGAACTTCCGCGAAGGTCTGACCGTGCAGGAATACTTTATTTCCACCCACGGTGCCCGCAAGGGTCTGGCCGATACCGCTATCCGTACCGCTGACTCCGGCTATCTGACCCGGCGTCTGGTGGACGTGGCCCAGGACGTAATCATCTTTACCGAGGATTGCGAAACCGAGCAGGGTATCATGCTTTCCGAGATGGACGCCAGTGAAGGCGGGCGCGTGACGGAAGCATTCGAGCGGCGCATTTTAGGCCGTACGGCTGCTTCGCCCATCACTGACCCGAATACGGGCGAAATCATCTGTGACCGCAACGAGGAATTGGACGAAGTTCGTTCCAAGGCGGTGGTGAAAGCCGGTATCAAGCAGGTTTACGTCCGGTCACCTCTGTCCTGCCAGGCCCAGTTCGGCGTCAGGACGAGATCGCCCGGTTCCATGTCCACCCGATCCCCGTTGACAGTGGTGAACGCCTTGCCGCTGATGAAAAACCGGAATGCAACGATGCTATGA
PROTEIN sequence
Length: 303
LYGSAATAVVADRMKRLGFKYSTKGGISIAVSDVEIPTGKQSLLEEADRKVIQIERQYKRGLLTEAERYRQTIDTWEETRAAVSDQVKDSLNPFGSLSMMTTSGAKGNIKQISQMSGMRGLMADPSGRVIELPIRSNFREGLTVQEYFISTHGARKGLADTAIRTADSGYLTRRLVDVAQDVIIFTEDCETEQGIMLSEMDASEGGRVTEAFERRILGRTAASPITDPNTGEIICDRNEELDEVRSKAVVKAGIKQVYVRSPLSCQAQFGVRTRSPGSMSTRSPLTVVNALPLMKNRNATML*