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scnpilot_p_inoc_scaffold_65726_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..882

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2SSX3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 292.0
  • Bit_score: 549
  • Evalue 1.70e-153
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL68667.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31 similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 292.0
  • Bit_score: 549
  • Evalue 2.30e-153
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 292.0
  • Bit_score: 547
  • Evalue 3.00e-153

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
CTGGCCTATTCACCGAGCCCGATGGCGCAGGCGCTGAGCCATGGCCGTTCGCGCCTCATCGGCCTGATCGTGGCCGACATCACCAACCCGTATTCCGTCGCCGTGCTGCGCGGCGCCGAAAAAGCCTGCCAGGACGCCGGCTACCTGGTGATGCTGTTCAACCTCGGCAACGAGAGCGAACGCGAGCGCGAGGCCATCGACGCGCTGGCGGGCTACCAGGTCGACGGCTTCATCCTCAACACGCTGGGGCGCGGCAGCAACGTGGTCGACGCGGTCACGCTGCACGGCAAGCCCGCCGTGCTGGTGGACCGCCGCCACACCGGCATGCACACCGACTTCGTCTCGCTCGACAACCATGCCGCGATGACGGCCACCTGCGGCCACCTGGTCGAGGGCGGCTATCGCGAACTGCTCTACGTCACCGAGCCGCAGAAGGGCGTGAGCTCGCGGCGCGAGCGCACGGCCGCGTTCGGCGCCTGCGTGGCCGCGCACGAGCCGCGCGTGGCGGGCGAGATTTTCGAATGCGTCGAGGGCGGCCATGAAGCGCTCGACGAGGCCCTGCAGGCGCTGCGCCAGCGTGCCAAGCGCGGCCGTCGCGCGGCGGTGGTCGCGGGCAATGCGGTGGTCACGCTGCGCGTGGCGCAGGCCATGGCGCGGCTGGGCTGGCAGTTCGGCAGCGACCTGGGCTTCGTCGGCTTCGACGATCCTGAGTGGGCTTCGCTCATCGGGCCGGGTTTGAGCACCGTGGCCCAGCCCACGGACGCCATCGGCCGCACGGCTGCTACGTGTCTGATCGAGCGGCTGCGGGGGCTGGAAGAGGCGCCGCGCCAGCTGCTGCTGCCTGGCGAGCTGGTGGTGCGGGGCTCTTCGCGGGCTCCCTAG
PROTEIN sequence
Length: 294
LAYSPSPMAQALSHGRSRLIGLIVADITNPYSVAVLRGAEKACQDAGYLVMLFNLGNESEREREAIDALAGYQVDGFILNTLGRGSNVVDAVTLHGKPAVLVDRRHTGMHTDFVSLDNHAAMTATCGHLVEGGYRELLYVTEPQKGVSSRRERTAAFGACVAAHEPRVAGEIFECVEGGHEALDEALQALRQRAKRGRRAAVVAGNAVVTLRVAQAMARLGWQFGSDLGFVGFDDPEWASLIGPGLSTVAQPTDAIGRTAATCLIERLRGLEEAPRQLLLPGELVVRGSSRAP*