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scnpilot_p_inoc_scaffold_73876_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 3..1007

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 335.0
  • Bit_score: 635
  • Evalue 3.70e-179
DNA-directed RNA polymerase subunit beta' n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=RPOC_OPITP similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 335.0
  • Bit_score: 635
  • Evalue 2.60e-179
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 335.0
  • Bit_score: 635
  • Evalue 7.40e-180

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Taxonomy

Opitutus terrae → Opitutus → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1005
ACCGTCCGTGGTGCCCGCAAGATGATCGAGAAAAAGTCGCCGGAAGTCTGGGACATCCTCGAAGAAGTGACGAAGGGCCATCCGGTGCTGCTCAATCGCGCGCCGACGCTGCACCGTCTCTCGATCCAGGCGTTCGAGCCCGTCCTCATCGAAGGCGAGGCCATTCGCGTTCACCCGCTCGTCTGCACGGCTTACAACGCCGACTTCGACGGTGACCAGATGGCCGTGCACGTGCCGCTGTCGCTCGAGGCGATCATGGAGTGCAAGCTCCTGATGATGGCGACGAACAACATCTTCTCGCCGTCCTCCGGCAAGCCGATCCTCACGCCGTCGCAGGACATTGTGCTCGGCGCCTATTACCTGACGATCGAGCCGCGCAAGAAGCCCGCCAAGGGCGAGCGCGTGCCGTTGCTCTCCGGCCTGCAGGAAGTGCTCTACGCGGTCGCCGATGGCGCGATGAAGAAACACGACTGGGTCGAGGTGCCGAATCCCGATTTCGGTCGCGAGACGGTTTTCGGTAACAAGGAGAAGAAGACGCTGCGCACCACGGTGGGCCGCGTGATCTTCAACCAGATCTGGCCGGCCGGTCTCGGCTTCGTGAACTTCCCCGTTCCGAAGGGCAAGCTCGGCGACCTGATTCTCAATACCTACAAGACCTCCGGCGACCAGGTCACGGTCGAGACCCTCGACCGCCTGAAGGAGCTCGGTTTCCAGACCGCCATGCAGGCGGGCATCTCGATCGGCATCGACGACATGATCATCCCGGAGGCGAAGAAGGACATCGTCGCCGACACCCGGAAAAAGATCGCCGAAGTCGAAGGCCAGTTCAACAAGGGCATCATCACGGAAGGTGAGCGCAAGAACAAGGTCATCGACCTTTGGACGAGCACCACCGACCGCATCGCGAAAGAGGTCTTCGCCAAGCTCGAAAGCAACGAAGGCCGCAACGAGGTGAACCCGGTGTACATCATGATGGACTCCGCTGCGCCTGGTAACAAGCAGCAG
PROTEIN sequence
Length: 335
TVRGARKMIEKKSPEVWDILEEVTKGHPVLLNRAPTLHRLSIQAFEPVLIEGEAIRVHPLVCTAYNADFDGDQMAVHVPLSLEAIMECKLLMMATNNIFSPSSGKPILTPSQDIVLGAYYLTIEPRKKPAKGERVPLLSGLQEVLYAVADGAMKKHDWVEVPNPDFGRETVFGNKEKKTLRTTVGRVIFNQIWPAGLGFVNFPVPKGKLGDLILNTYKTSGDQVTVETLDRLKELGFQTAMQAGISIGIDDMIIPEAKKDIVADTRKKIAEVEGQFNKGIITEGERKNKVIDLWTSTTDRIAKEVFAKLESNEGRNEVNPVYIMMDSAAPGNKQQ