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scnpilot_p_inoc_scaffold_70093_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..249

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 82.0
  • Bit_score: 140
  • Evalue 9.10e-31
transcription-repair coupling factor n=1 Tax=Thiobacillus thioparus RepID=UPI00036D1DB7 similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 82.0
  • Bit_score: 138
  • Evalue 2.50e-30
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 65.0
  • Bit_score: 88
  • Evalue 8.20e-16

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
CTGCTCGACACCCACCGTCTGCGGCTGGCCGCCCGCCTGCTCGGCATCATGAAGGTCGATGCCAATGCGGACAGCATCCTGCTGCAATTCGTGCCGCAGCCGCCGATCGATCCGGGCCGTATCATCCAGCTCATCCAGACCCGGCGCGACATCAAGCTGGCAGGCGAAAACCGCCTGCGCTGGCATGCGTCGTCCCCTCCCGACGTGCGGGCGGCGAATGTCGTCTCCATGTTCAACTTCTTGAATTAA
PROTEIN sequence
Length: 83
LLDTHRLRLAARLLGIMKVDANADSILLQFVPQPPIDPGRIIQLIQTRRDIKLAGENRLRWHASSPPDVRAANVVSMFNFLN*