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scnpilot_p_inoc_scaffold_70318_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 615..1046

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YN42_TREPZ similarity UNIREF
DB: UNIREF100
  • Identity: 32.4
  • Coverage: 145.0
  • Bit_score: 99
  • Evalue 2.20e-18
Uncharacterized protein {ECO:0000313|EMBL:KKB53505.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldste similarity UNIPROT
DB: UniProtKB
  • Identity: 34.3
  • Coverage: 137.0
  • Bit_score: 101
  • Evalue 1.10e-18
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 31.7
  • Coverage: 145.0
  • Bit_score: 98
  • Evalue 1.40e-18

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Taxonomy

Parabacteroides goldsteinii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 432
TTGATAAATAAACCGAAAATAGACTTTTCATCTCTGAATAAGGAGAAGCTTATAGTTTTCTTTTATTCTTCCATATCCGCTGTAATAAGAATAGTTACTAATCTAGTGGCTGTTAAAGTGATGTCTGCAAAGCTTGGGCCACATGGTTTAGCAGTTATTGGACAATTTTCAAACATCGTAGCCATTGTTCTTGCGGTGAGTACGACTGCGTTATCGCAAGGATTGATCAAGTATCTGGCAGAATATAATTTTTCGCACAAAGAAAAGGTCAAGCCTTTGCTCTCGTCGACAATAAAGTTGTCATTGTTTATTGCGATATTGTGCAGTTTAATAATTATTTTGTTTTCAAAAAGTCTTTCACGCCACTTCTTATTTTCAAGTGCTTACGCAAGTACATTTATAATTTTTGGTATAACTCTAACCTTTAACGTA
PROTEIN sequence
Length: 144
LINKPKIDFSSLNKEKLIVFFYSSISAVIRIVTNLVAVKVMSAKLGPHGLAVIGQFSNIVAIVLAVSTTALSQGLIKYLAEYNFSHKEKVKPLLSSTIKLSLFIAILCSLIIILFSKSLSRHFLFSSAYASTFIIFGITLTFNV