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scnpilot_p_inoc_scaffold_2

Search features with annotation key words

Displaying items 301-330 of 800 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2_301
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

355554..356405
DNA (852bp) protein (284aa)
Alpha/beta superfamily hydrolase id=7716970 bin=BACIGN_2 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
Alpha/beta hydrolase fold containing protein {ECO:0000313|EMBL:EHO40503.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
alpha/beta superfamily hydrolase
scnpilot_p_inoc_scaffold_2_302
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

356390..356827
DNA (438bp) protein (146aa)
id=7716969 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
scnpilot_p_inoc_scaffold_2_303
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(356831..358174)
DNA (1344bp) protein (448aa)
Putative uncharacterized protein id=7716968 bin=BACIGN_2 species=Halomonas sp. HAL1 genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein Tax=RBG_16_Caldithrix_48_16_curated
scnpilot_p_inoc_scaffold_2_304
Chlorobaculum parvum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

358290..359705
DNA (1416bp) protein (472aa)
UDP-N-acetylmuramate; K02558 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-] id=7716967 bin=BACIGN_2 species=Chlorobaculum parvum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP rbh
UDP-N-acetylmuramate
UDP-N-acetylmuramate {ECO:0000313|EMBL:ACF11967.1}; Flags: Precursor;; TaxID=517417 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.;" source="Chlorobaculum parvum (
scnpilot_p_inoc_scaffold_2_305
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(359695..363972)
DNA (4278bp) protein (1426aa)
peptidase S8/S53 subtilisin kexin sedolisin id=7716966 bin=BACIGN_2 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP rbh
peptidase S8/S53 subtilisin kexin sedolisin
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_p_inoc_scaffold_2_306
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(363956..366592)
DNA (2637bp) protein (879aa)
RecQ familyATP-dependent DNA helicase; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] id=7716965 bin=BACIGN_2 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=BACIGN_2 organism_group=Unknown_CP rbh
RecQ familyATP-dependent DNA helicase
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_p_inoc_scaffold_2_307
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(366603..367634)
DNA (1032bp) protein (344aa)
id=7716964 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
id=7716964 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_2_308
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(367637..368665)
DNA (1029bp) protein (343aa)
purM; Phosphoribosylaminoimidazole synthetase; K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] id=7716963 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
purM; Phosphoribosylaminoimidazole synthetase; K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=GWF2_RIF_IGX_33_9_curated
purM; phosphoribosylaminoimidazole synthetase
scnpilot_p_inoc_scaffold_2_309
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(368643..369383)
DNA (741bp) protein (247aa)
Glycosyltransferase, probably involved in cell wall biogenesis id=7716962 bin=BACIGN_2 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=BACIGN_2 organism_group=Unknown_CP rbh
putative glycosyltransferase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
putative glycosyltransferase
scnpilot_p_inoc_scaffold_2_310
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(369404..370453)
DNA (1050bp) protein (350aa)
hypothetical protein id=7716961 bin=BACIGN_2 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_p_inoc_scaffold_2_311
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(370443..371801)
DNA (1359bp) protein (453aa)
hypothetical protein id=7716960 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2_312
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(371798..372388)
DNA (591bp) protein (197aa)
id=7716959 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
id=7716959 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_2_313
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

372501..373376
DNA (876bp) protein (292aa)
putative Xre family transcriptional regulator id=7716958 bin=BACIGN_2 species=Selenomonas ruminantium genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
putative Xre family transcriptional regulator
scnpilot_p_inoc_scaffold_2_314
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(373373..374350)
DNA (978bp) protein (326aa)
KpsF/GutQ family protein; K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13] id=7716957 bin=BACIGN_2 species=Marinobacter nanhaiticus genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
arabinose 5-phosphate isomerase
Tax=BJP_IG2069_Anaerolineales_43_63
scnpilot_p_inoc_scaffold_2_315
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(374430..379145)
DNA (4716bp) protein (1572aa)
hypothetical protein id=7716956 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2_316
Chlorobium limicola, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(379395..379850)
DNA (456bp) protein (152aa)
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2); K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] id=7716955 bin=BACIGN_2 species=Prosthecochloris vibrioformis genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP rbh
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
scnpilot_p_inoc_scaffold_2_317
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

380041..382449
DNA (2409bp) protein (803aa)
TonB-dependent receptor plug id=7716954 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
TonB-dependent receptor plug
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_p_inoc_scaffold_2_318
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(382465..386121)
DNA (3657bp) protein (1219aa)
methionine synthase (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] id=7716953 bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
Methionine synthase {ECO:0000313|EMBL:AEN74325.1}; EC=2.1.1.13 {ECO:0000313|EMBL:AEN74325.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; R
methionine synthase (EC:2.1.1.13)
scnpilot_p_inoc_scaffold_2_319

Not on your lists

comp(386208..386900)
DNA (693bp) protein (231aa)
hypothetical protein id=7716952 bin=BACIGN_2 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
Uncharacterized protein family UPF0066 domain protein {ECO:0000313|EMBL:AEI30745.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2_320
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(386900..387625)
DNA (726bp) protein (242aa)
hypothetical protein id=7716951 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2_321
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

387755..388579
DNA (825bp) protein (275aa)
NGG1p interacting factor 3 protein, NIF3 id=7716950 bin=BACIGN_2 species=unknown genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
NGG1p interacting factor 3 protein, NIF3
scnpilot_p_inoc_scaffold_2_322
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

388586..389323
DNA (738bp) protein (246aa)
hypothetical protein; K07164 id=7716949 bin=BACIGN_2 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
Zn-ribbon protein, possibly nucleic acid-binding protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_p_inoc_scaffold_2_323
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

389762..390109
DNA (348bp) protein (116aa)
id=7716948 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
scnpilot_p_inoc_scaffold_2_324
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

390106..390594
DNA (489bp) protein (163aa)
id=7716947 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
id=3317024 Tax=GWF2_RIF_IGX_33_9_curated
scnpilot_p_inoc_scaffold_2_325
uncultured Bacteroidetes bacterium, Bacteroidetes, Bacteria

Not on your lists

390641..391522
DNA (882bp) protein (294aa)
lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] id=7716946 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
lipoyl synthase
scnpilot_p_inoc_scaffold_2_326
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

391519..392289
DNA (771bp) protein (257aa)
beta-lactamase domain-containing protein; K06167 PhnP protein id=7716945 bin=BACIGN_2 species=Niabella soli genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
hydrolase
Hydrolase {ECO:0000313|EMBL:AHF16636.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_p_inoc_scaffold_2_327
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

392403..392879
DNA (477bp) protein (159aa)
MarR family transcriptional regulator id=7716944 bin=BACIGN_2 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=BACIGN_2 organism_group=Unknown_CP rbh
MarR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_2_328
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

392937..393392
DNA (456bp) protein (152aa)
DoxX family protein; K15977 putative oxidoreductase id=7716943 bin=BACIGN_2 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=BACIGN_2 organism_group=Unknown_CP
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:ACT16617.1}; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M
scnpilot_p_inoc_scaffold_2_329
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(393760..394863)
DNA (1104bp) protein (368aa)
segregation and condensation protein B; K06024 segregation and condensation protein B id=7716942 bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
scpB; Segregation and condensation protein B; K06024 segregation and condensation protein B Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Segregation and condensation protein ScpB
scnpilot_p_inoc_scaffold_2_330
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(394856..395620)
DNA (765bp) protein (255aa)
scpA; segregation and condensation protein A; K05896 segregation and condensation protein A id=7716941 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
scpA; segregation and condensation protein A
Tax=BJP_IG2069_Ignavibacteriae_38_11
Displaying items 301-330 of 800 in total

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