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scnpilot_p_inoc_scaffold_2

Search features with annotation key words

Displaying items 361-390 of 800 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2_361
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(431628..432173)
DNA (546bp) protein (182aa)
zinc-binding CMP/dCMP deaminase id=7716910 bin=BACIGN_2 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
Cytidine and deoxycytidylate deaminase zinc-binding region
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:AHY48203.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacterac
scnpilot_p_inoc_scaffold_2_362
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

432210..432689
DNA (480bp) protein (160aa)
D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-] id=7716909 bin=BACIGN_2 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP rbh
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=717605 species="Bacter
D-tyrosyl-tRNA(Tyr) deacylase
scnpilot_p_inoc_scaffold_2_363
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(433143..434981)
DNA (1839bp) protein (613aa)
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] id=7716908 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_p_inoc_scaffold_2_364
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(434981..435850)
DNA (870bp) protein (290aa)
hypothetical protein; K07071 id=7716907 bin=BACIGN_2 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH75815.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovib
scnpilot_p_inoc_scaffold_2_365
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists


comp(435931..436377)
DNA (447bp) protein (149aa)
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 id=7716906 bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
50S ribosomal protein L9 Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
50S ribosomal protein L9
scnpilot_p_inoc_scaffold_2_366
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists


comp(436416..436826)
DNA (411bp) protein (137aa)
30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 id=7716905 bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
30S ribosomal protein S6
scnpilot_p_inoc_scaffold_2_367
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists


437079..438533
DNA (1455bp) protein (485aa)
RNA binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1 id=7716904 bin=BACIGN_2 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=BACIGN_2 organism_group=Unknown_CP rbh
30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
RNA binding S1 domain-containing protein
scnpilot_p_inoc_scaffold_2_368
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

438609..439403
DNA (795bp) protein (265aa)
hypothetical protein id=7716903 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
Gingipain R Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2_369
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

439462..442344
DNA (2883bp) protein (961aa)
Subtilisin-like serine protease id=7716902 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
Subtilisin-like serine protease Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
subtilisin-like serine protease
scnpilot_p_inoc_scaffold_2_370
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(442397..443815)
DNA (1419bp) protein (473aa)
TrmA family RNA methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] id=7716901 bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
TrmA family RNA methyltransferase
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_p_inoc_scaffold_2_371
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

443859..444887
DNA (1029bp) protein (343aa)
magnesium and cobalt transport protein CorA; K03284 magnesium transporter id=7716900 bin=BACIGN_2 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=BACIGN_2 organism_group=Unknown_CP rbh
magnesium and cobalt transport protein CorA; K03284 magnesium transporter Tax=GWB2_Chloroflexi_54_36_curated
magnesium and cobalt transport protein CorA
scnpilot_p_inoc_scaffold_2_372
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

444880..446025
DNA (1146bp) protein (382aa)
N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] id=7716899 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
N-acetylmuramoyl-L-alanine amidase
scnpilot_p_inoc_scaffold_2_373
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

446060..447928
DNA (1869bp) protein (623aa)
ABC transporter-like protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] id=7716898 bin=BACIGN_2 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP rbh
ABC transporter-like protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
ABC transporter-like protein
scnpilot_p_inoc_scaffold_2_374
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(447908..449608)
DNA (1701bp) protein (567aa)
dolichyl-phosphate-mannose-protein mannosyltransferase (EC:2.4.1.109) Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Glycosyl transferase, family 39 id=7716897 bin=BACIGN_2 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
glycosyl transferase family protein
scnpilot_p_inoc_scaffold_2_375
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(449605..450663)
DNA (1059bp) protein (353aa)
Putative membrane-associated Zn-dependent protease id=7716896 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
peptidase M50 Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
membrane-associated Zn-dependent protease
scnpilot_p_inoc_scaffold_2_376
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(450668..452173)
DNA (1506bp) protein (502aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] id=7716895 bin=BACIGN_2 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP rbh
lysS; lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
scnpilot_p_inoc_scaffold_2_377
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

452233..452961
DNA (729bp) protein (243aa)
AcrR family transcriptional regulator id=7716894 bin=BACIGN_2 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=BACIGN_2 organism_group=Unknown_CP rbh
TetR family transcriptional regulator Tax=RIFOXYC12_FULL_TA06_54_24_curated
AcrR family transcriptional regulator
scnpilot_p_inoc_scaffold_2_378
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

452958..453536
DNA (579bp) protein (193aa)
TetR family transcriptional regulator id=7716893 bin=BACIGN_2 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=BACIGN_2 organism_group=Unknown_CP rbh
transcriptional regulator, TetR family Tax=GWB1_Spirochaetes_36_13_curated
transcriptional regulator, TetR family
scnpilot_p_inoc_scaffold_2_379
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

453880..457149
DNA (3270bp) protein (1090aa)
PKD domain-containing protein id=7716892 bin=BACIGN_2 species=Isoptericola variabilis genus=Isoptericola taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
PKD domain containing protein {ECO:0000313|EMBL:AKG41444.1}; TaxID=408015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;"
PKD domain-containing protein
scnpilot_p_inoc_scaffold_2_380
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(457789..458448)
DNA (660bp) protein (220aa)
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] id=7716891 bin=BACIGN_2 species=Alicyclobacillus hesperidum genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP rbh
RNA methyltransferase, TrmH family, group 3 Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
TrmH family RNA methyltransferase
scnpilot_p_inoc_scaffold_2_381
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(458574..459872)
DNA (1299bp) protein (433aa)
kynureninase (EC:3.7.1.3); K01556 kynureninase [EC:3.7.1.3] id=7716890 bin=BACIGN_2 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
kynU; kynureninase (EC:3.7.1.3); K01556 kynureninase [EC:3.7.1.3] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Kynureninase (EC:3.7.1.3)
scnpilot_p_inoc_scaffold_2_382
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

459963..460418
DNA (456bp) protein (152aa)
id=7716889 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
id=7716889 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_2_383
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(460453..460785)
DNA (333bp) protein (111aa)
hypothetical protein id=7716888 bin=BACIGN_2 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=GWA2_Ignavibacteriae_55_25_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2_384
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

460874..461266
DNA (393bp) protein (131aa)
panD; aspartate 1-decarboxylase; K01579 aspartate 1-decarboxylase [EC:4.1.1.11] id=7716887 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
panD; aspartate alpha-decarboxylase (EC:4.1.1.11); K01579 aspartate 1-decarboxylase [EC:4.1.1.11] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
panD; aspartate 1-decarboxylase
scnpilot_p_inoc_scaffold_2_385
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

461266..462036
DNA (771bp) protein (257aa)
nucleotidyl transferase; K11528 UDP-N-acetylglucosamine pyrophosphorylase [EC:2.7.7.23] id=7716886 bin=BACIGN_2 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP rbh
UDP-N-acetylglucosamine pyrophosphorylase (EC:2.7.7.23); K11528 UDP-N-acetylglucosamine pyrophosphorylase [EC:2.7.7.23] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
nucleotidyl transferase
scnpilot_p_inoc_scaffold_2_386
uncultured Bacteroidetes bacterium, Bacteroidetes, Bacteria

Not on your lists

462033..462437
DNA (405bp) protein (135aa)
methylmalonyl-CoA epimerase (EC:5.1.99.1); K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] id=7716885 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:BAL56014.1}; TaxID=152509 species="Bacteria; Bacteroidetes; environmental samples.;" source="uncultured Bacteroidetes bacterium.;"
methylmalonyl-CoA epimerase
scnpilot_p_inoc_scaffold_2_387
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

462454..463074
DNA (621bp) protein (207aa)
phosphoglycerate mutase (EC:5.4.2.1) id=7716884 bin=BACIGN_2 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO
scnpilot_p_inoc_scaffold_2_388
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

463067..464767
DNA (1701bp) protein (567aa)
peptidase U62 modulator of DNA gyrase id=7716883 bin=BACIGN_2 species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
peptidase U62 modulator of DNA gyrase
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_p_inoc_scaffold_2_389
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

464764..466536
DNA (1773bp) protein (591aa)
peptidase U62, modulator of DNA gyrase id=7716882 bin=BACIGN_2 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
peptidase U62 modulator of DNA gyrase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
peptidase U62, modulator of DNA gyrase
scnpilot_p_inoc_scaffold_2_390
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(466629..468887)
DNA (2259bp) protein (753aa)
TonB-dependent receptor id=7716881 bin=BACIGN_2 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACT94324.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
Displaying items 361-390 of 800 in total

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