ggKbase home page

scnpilot_p_inoc_scaffold_2

Search features with annotation key words

Displaying items 541-570 of 800 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2_541
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

653387..654097
DNA (711bp) protein (237aa)
hypothetical protein id=7716729 bin=BACIGN_2 species=Bacteroides salyersiae genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
Uncharacterized protein {ECO:0000313|EMBL:EIY66363.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C
putative transmembrane PAP2-family protein
scnpilot_p_inoc_scaffold_2_542
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

654101..654910
DNA (810bp) protein (270aa)
nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase id=7716728 bin=BACIGN_2 species=Chlorobaculum parvum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP rbh
nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase
scnpilot_p_inoc_scaffold_2_543
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

654907..656277
DNA (1371bp) protein (457aa)
murC; UDP-N-acetylmuramate-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] id=7716727 bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
UDP-N-acetylmuramate/alanine ligase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
UDP-N-acetylmuramate/alanine ligase
scnpilot_p_inoc_scaffold_2_544
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

656323..658410
DNA (2088bp) protein (696aa)
surA; Parvulin-like peptidyl-prolyl isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] id=7716726 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
surA; Parvulin-like peptidyl-prolyl isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
surA; Parvulin-like peptidyl-prolyl isomerase
scnpilot_p_inoc_scaffold_2_545
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

658440..659720
DNA (1281bp) protein (427aa)
surA; Parvulin-like peptidyl-prolyl isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] id=7716725 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
surA; Parvulin-like peptidyl-prolyl isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
surA; Parvulin-like peptidyl-prolyl isomerase
scnpilot_p_inoc_scaffold_2_546
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(659908..661815)
DNA (1908bp) protein (636aa)
hypothetical protein id=7716724 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein
hypothetical protein Tax=RBG_16_Ignavibacteria_36_9_curated
scnpilot_p_inoc_scaffold_2_547
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(661875..664697)
DNA (2823bp) protein (941aa)
RCC1 repeat-containing protein id=7716723 bin=BACIGN_2 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
BNR repeat domain protein {ECO:0000313|EMBL:KFE60110.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hy
RCC1 repeat-containing protein
scnpilot_p_inoc_scaffold_2_548
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

664986..669980
DNA (4995bp) protein (1665aa)
hypothetical protein id=7716722 bin=BACIGN_2 species=Streptomyces rimosus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
Uncharacterized protein {ECO:0000313|EMBL:EPH45206.1}; TaxID=1286094 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2_549
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

669996..674357
DNA (4362bp) protein (1454aa)
hypothetical protein id=7716721 bin=BACIGN_2 species=Achromobacter xylosoxidans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP17690.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylos
scnpilot_p_inoc_scaffold_2_550
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(674411..674971)
DNA (561bp) protein (187aa)
id=7716720 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
id=7716720 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_2_551
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

674990..675991
DNA (1002bp) protein (334aa)
transcriptional regulator, effector-binding domain/component id=7716719 bin=BACIGN_2 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
transcriptional regulator, effector-binding domain/component Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2_552
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

676008..676544
DNA (537bp) protein (179aa)
id=7716718 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
scnpilot_p_inoc_scaffold_2_553
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

676547..676849
DNA (303bp) protein (101aa)
hypothetical protein id=7716717 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2_554
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

676846..677769
DNA (924bp) protein (308aa)
GTP-binding protein Era-like-protein; K03595 GTP-binding protein Era id=7716716 bin=BACIGN_2 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
GTP-binding protein Era
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_p_inoc_scaffold_2_555
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

677863..678612
DNA (750bp) protein (250aa)
DNA uptake lipoprotein; K05807 putative lipoprotein id=7716715 bin=BACIGN_2 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
DNA uptake lipoprotein; K05807 putative lipoprotein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
DNA uptake lipoprotein
scnpilot_p_inoc_scaffold_2_556
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

678609..679088
DNA (480bp) protein (160aa)
acyl-CoA hydrolase id=7716714 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
acyl-CoA hydrolase
Acyl-CoA hydrolase {ECO:0000313|EMBL:AFH50781.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium alb
scnpilot_p_inoc_scaffold_2_557
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

679085..680383
DNA (1299bp) protein (433aa)
Uncharacterized protein id=7716713 bin=BACIGN_2 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
scnpilot_p_inoc_scaffold_2_558
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

680413..681426
DNA (1014bp) protein (338aa)
Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] id=7716712 bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Holliday junction DNA helicase RuvB
scnpilot_p_inoc_scaffold_2_559
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

681423..682241
DNA (819bp) protein (273aa)
alias=RBG1_251,RBG1_C00001G00251 id=7716711 bin=BACIGN_2 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
id=1249809 Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
scnpilot_p_inoc_scaffold_2_560
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


682279..683745
DNA (1467bp) protein (489aa)
prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] id=7716710 bin=BACIGN_2 species=Niabella soli genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1463156 species="Bacteria; Bacte
prolyl-tRNA synthetase (EC:6.1.1.15)
scnpilot_p_inoc_scaffold_2_561
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

683777..684514
DNA (738bp) protein (246aa)
Ankyrin id=7716709 bin=BACIGN_2 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
Ankyrin {ECO:0000313|EMBL:EYR70160.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
ankyrin
scnpilot_p_inoc_scaffold_2_562
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(684635..686038)
DNA (1404bp) protein (468aa)
id=7716708 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
id=7716708 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_2_563
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

686211..688013
DNA (1803bp) protein (601aa)
lepA; Membrane GTPase LepA; K03596 GTP-binding protein LepA id=7716707 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
GTP-binding protein LepA
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_p_inoc_scaffold_2_564
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

688035..689027
DNA (993bp) protein (331aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] id=7716706 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
lepB; signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
signal peptidase I (EC:3.4.21.89)
scnpilot_p_inoc_scaffold_2_565
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

689024..689866
DNA (843bp) protein (281aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] id=7716705 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
lepB; signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
signal peptidase I (EC:3.4.21.89)
scnpilot_p_inoc_scaffold_2_566
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

689863..690438
DNA (576bp) protein (192aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] id=7716704 bin=BACIGN_2 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobactera
scnpilot_p_inoc_scaffold_2_567
uncultured Bacteroidetes bacterium, Bacteroidetes, Bacteria

Not on your lists

690435..691589
DNA (1155bp) protein (385aa)
Oxygen-independent coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] id=7716703 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:BAL56023.1}; TaxID=152509 species="Bacteria; Bacteroidetes; environmental samples.;" source="uncultured Bacteroidetes bacterium.;"
Oxygen-independent coproporphyrinogen III oxidase
scnpilot_p_inoc_scaffold_2_568
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(691720..692952)
DNA (1233bp) protein (411aa)
lolC; lipoprotein releasing system transmembrane protein LolC; K09808 lipoprotein-releasing system permease protein id=7716702 bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
Lipoprotein-releasing system permease protein; K09808 lipoprotein-releasing system permease protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
lolC; lipoprotein releasing system transmembrane protein LolC
scnpilot_p_inoc_scaffold_2_569
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(692980..695079)
DNA (2100bp) protein (700aa)
polyphosphate kinase (EC:2.7.4.1); K00937 polyphosphate kinase [EC:2.7.4.1] id=7716701 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
polyphosphate kinase; K00937 polyphosphate kinase [EC:2.7.4.1] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
polyphosphate kinase (EC:2.7.4.1)
scnpilot_p_inoc_scaffold_2_570
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(695361..696092)
DNA (732bp) protein (244aa)
abortive phage resistance protein id=7716700 bin=BACIGN_2 species=Acinetobacter guillouiae genus=Acinetobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
Abortive phage resistance protein {ECO:0000313|EMBL:KGM52344.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobact
abortive phage resistance protein
Displaying items 541-570 of 800 in total

View Taxonomy