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scnpilot_p_inoc_scaffold_2

Search features with annotation key words

Displaying items 241-270 of 800 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2_241
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(285267..286946)
DNA (1680bp) protein (560aa)
putative histidine kinase id=7717029 bin=BACIGN_2 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=BACIGN_2 organism_group=Unknown_CP rbh
putative histidine kinase
Putative Histidine kinase {ECO:0000313|EMBL:CBK43653.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
scnpilot_p_inoc_scaffold_2_242
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

287265..287564
DNA (300bp) protein (100aa)
id=7717028 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7717028 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_2_243
Dactylellina haptotyla, Dactylellina, Orbiliales, Orbiliomycetes, Ascomycota, Fungi

Not on your lists

287772..289241
DNA (1470bp) protein (490aa)
FAD/FMN-containing dehydrogenase id=7717027 bin=BACIGN_2 species=Fusarium oxysporum genus=Fusarium taxon_order=Hypocreales taxon_class=Sordariomycetes phylum=Ascomycota tax=BACIGN_2 organism_group=Unknown_CP rbh
Uncharacterized protein {ECO:0000313|EMBL:EPS42825.1}; TaxID=1284197 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Orbiliomycetes; Orbiliales; Orbiliaceae; mitosporic Orbiliaceae; Da
FAD/FMN-containing dehydrogenase
scnpilot_p_inoc_scaffold_2_244
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(289271..291571)
DNA (2301bp) protein (767aa)
TonB-dependent receptor plug id=7717026 bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AFN73727.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribac
scnpilot_p_inoc_scaffold_2_245
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

291853..292788
DNA (936bp) protein (312aa)
fatty acid desaturase family protein id=7717025 bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
fatty acid desaturase Tax=RBG_16_Ignavibacteria_36_9_curated
fatty acid desaturase
scnpilot_p_inoc_scaffold_2_246
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(292736..293125)
DNA (390bp) protein (130aa)
hypothetical protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] id=7717024 bin=BACIGN_2 species=Gramella forsetii genus=Gramella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Predicted thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2_247
Mycobacterium sinense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(293085..294083)
DNA (999bp) protein (333aa)
hypothetical protein id=7717023 bin=BACIGN_2 species=Mycobacterium sp. genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF34829.1}; TaxID=875328 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain JDM601).;
scnpilot_p_inoc_scaffold_2_248
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(294126..295727)
DNA (1602bp) protein (534aa)
Na+/H+ antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family id=7717022 bin=BACIGN_2 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
Na+/H+ antiporter
Na+/H+ antiporter {ECO:0000313|EMBL:AEI46483.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DS
scnpilot_p_inoc_scaffold_2_249
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(295769..296455)
DNA (687bp) protein (229aa)
two component transcriptional regulator; K07667 two-component system, OmpR family, KDP operon response regulator KdpE id=7717021 bin=BACIGN_2 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AAZ45835.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechlorom
scnpilot_p_inoc_scaffold_2_250
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(296452..299154)
DNA (2703bp) protein (901aa)
kdpD; Osmosensitive K+ channel histidine kinase KdpD; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] id=7717020 bin=BACIGN_2 species=Methylacidiphilum fumariolicum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=BACIGN_2 organism_group=Unknown_CP rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Met
kdpD; Osmosensitive K+ channel histidine kinase KdpD
scnpilot_p_inoc_scaffold_2_251
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(299163..299717)
DNA (555bp) protein (185aa)
potassium-transporting ATPase, c subunit (EC:3.6.3.12); K01548 K+-transporting ATPase ATPase C chain [EC:3.6.3.12] id=7717019 bin=BACIGN_2 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
potassium-transporting ATPase, c subunit (EC:3.6.3.12); K01548 K+-transporting ATPase ATPase C chain [EC:3.6.3.12] Tax=GWE2_Bacteroidetes_40_63_curated
K+-transporting ATPase subunit C
scnpilot_p_inoc_scaffold_2_252
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(299729..300805)
DNA (1077bp) protein (359aa)
hypothetical protein id=7717018 bin=BACIGN_2 species=Flavobacterium sp. F52 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
Outer membrane protein {ECO:0000313|EMBL:KIA93674.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
hypothetical protein
scnpilot_p_inoc_scaffold_2_253
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(300802..302862)
DNA (2061bp) protein (687aa)
kdpB; K+-transporting ATPase subunit B (EC:3.6.3.12); K01547 K+-transporting ATPase ATPase B chain [EC:3.6.3.12] id=7717017 bin=BACIGN_2 species=Bdellovibrio exovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2_254
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(302859..304550)
DNA (1692bp) protein (564aa)
potassium-transporting ATPase, a subunit (EC:3.6.3.12); K01546 K+-transporting ATPase ATPase A chain [EC:3.6.3.12] id=7717016 bin=BACIGN_2 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
potassium-transporting ATPase, a subunit (EC:3.6.3.12); K01546 K+-transporting ATPase ATPase A chain [EC:3.6.3.12] Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2_255
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(304670..305434)
DNA (765bp) protein (255aa)
MerR family transcriptional regulator id=7717015 bin=BACIGN_2 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
positive regulation of multidrug-efflux transporter genes (bmr and blt) Tax=RBG_16_Aminicenantes_63_16_curated
MerR family transcriptional regulator
scnpilot_p_inoc_scaffold_2_256
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(305506..305916)
DNA (411bp) protein (137aa)
id=7717014 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7717014 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_2_257
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

306191..306529
DNA (339bp) protein (113aa)
id=7717013 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7717013 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_2_258
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(306651..307424)
DNA (774bp) protein (258aa)
hmuV; hemin ABC transporter ATP-binding protein (EC:3.6.3.-); K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] id=7717012 bin=BACIGN_2 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
Hemin import ATP-binding protein HmuV {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041307}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041330};; TaxID=1538553 spec
hmuV; hemin importer ATP-binding subunit (EC:3.6.3.-)
scnpilot_p_inoc_scaffold_2_259
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(307421..308497)
DNA (1077bp) protein (359aa)
transport system permease; K02015 iron complex transport system permease protein id=7717011 bin=BACIGN_2 species=Allochromatium vinosum genus=Allochromatium taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
Iron ABC transporter {ECO:0000313|EMBL:KFG68086.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
transport system permease
scnpilot_p_inoc_scaffold_2_260
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(308494..309345)
DNA (852bp) protein (284aa)
hemin-binding periplasmic protein; K02016 iron complex transport system substrate-binding protein id=7717010 bin=BACIGN_2 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
hemin-binding periplasmic protein
Hemin-binding periplasmic protein {ECO:0000313|EMBL:BAC88521.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC
scnpilot_p_inoc_scaffold_2_261
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(309338..310348)
DNA (1011bp) protein (337aa)
hemS; hemin transport protein hems; K07225 putative hemin transport protein id=7717009 bin=BACIGN_2 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
Strain MEJ086 contig_41, whole genome shotgun sequence {ECO:0000313|EMBL:KIP98516.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
hemin transport protein HemS
scnpilot_p_inoc_scaffold_2_262
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

310533..311789
DNA (1257bp) protein (419aa)
hypothetical protein id=7717008 bin=BACIGN_2 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2_263
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

311786..313777
DNA (1992bp) protein (664aa)
outer membrane cobalamin receptor protein; K02014 iron complex outermembrane recepter protein id=7717007 bin=BACIGN_2 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
outer membrane cobalamin receptor protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_p_inoc_scaffold_2_264
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

313780..314769
DNA (990bp) protein (330aa)
hypothetical protein id=7717006 bin=BACIGN_2 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein Tax=CG_Bacteroid_02
hypothetical protein
scnpilot_p_inoc_scaffold_2_265
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(314780..315196)
DNA (417bp) protein (139aa)
OsmC family protein; K07397 putative redox protein id=7717005 bin=BACIGN_2 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=BACIGN_2 organism_group=Unknown_CP
Osmotically inducible protein OsmC {ECO:0000313|EMBL:KGO90397.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavoba
OsmC family protein
scnpilot_p_inoc_scaffold_2_266
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

315434..316690
DNA (1257bp) protein (419aa)
putative ATP-dependent RNA helicase RhlE; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] id=7717004 bin=BACIGN_2 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] Tax=GWB1_Spirochaetes_36_13_curated
putative ATP-dependent RNA helicase RhlE
scnpilot_p_inoc_scaffold_2_267
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

316708..318222
DNA (1515bp) protein (505aa)
PAS/PAC sensor hybrid histidine kinase id=7717003 bin=BACIGN_2 species=Pedobacter sp. BAL39 genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
Sensory transduction histidine kinase {ECO:0000313|EMBL:EDM37197.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Ped
PAS/PAC sensor hybrid histidine kinase
scnpilot_p_inoc_scaffold_2_268
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(318194..318625)
DNA (432bp) protein (144aa)
thioesterase; K12500 thioesterase III [EC:3.1.2.-] id=7717002 bin=BACIGN_2 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Acyl-ACP thioesterase {ECO:0000313|EMBL:EHQ30750.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibac
putative thioesterase
scnpilot_p_inoc_scaffold_2_269
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

318702..319655
DNA (954bp) protein (318aa)
ribonuclease E (EC:3.1.4.-); K08300 ribonuclease E [EC:3.1.26.12] id=7717001 bin=BACIGN_2 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein Tax=CSP1_4_Chloroflexi
hypothetical protein
scnpilot_p_inoc_scaffold_2_270
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(319674..320855)
DNA (1182bp) protein (394aa)
homoserine dehydrogenase; K00003 homoserine dehydrogenase [EC:1.1.1.3] id=7717000 bin=BACIGN_2 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
Homoserine dehydrogenase {ECO:0000313|EMBL:KGO93771.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium su
homoserine dehydrogenase
Displaying items 241-270 of 800 in total

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