ggKbase home page

scnpilot_p_inoc_scaffold_292

Search features with annotation key words

Displaying items 61-90 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_292_61
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

60999..61925
DNA (927bp) protein (309aa)
id=7718714 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
id=7718714 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_292_62
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

62010..63116
DNA (1107bp) protein (369aa)
alanine dehydrogenase (EC:1.4.1.1); K00259 alanine dehydrogenase [EC:1.4.1.1] id=7718713 bin=BACIGN_2 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
alanine dehydrogenase (EC:1.4.1.1); K00259 alanine dehydrogenase [EC:1.4.1.1] Tax=GWC2_Ignavibacteria_rel_36_12_curated
alanine dehydrogenase
scnpilot_p_inoc_scaffold_292_63
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(63180..64142)
DNA (963bp) protein (321aa)
Permease id=7718712 bin=BACIGN_2 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD56988.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
scnpilot_p_inoc_scaffold_292_64
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(64153..64488)
DNA (336bp) protein (112aa)
id=7718711 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718711 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_292_65
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(64570..64986)
DNA (417bp) protein (139aa)
transposase id=7718710 bin=BACIGN_2 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=BACIGN_2 organism_group=Unknown_CP
transposase Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
transposase
scnpilot_p_inoc_scaffold_292_66
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

65390..67063
DNA (1674bp) protein (558aa)
phenylacetic acid degradation protein paaN id=7718709 bin=BACIGN_2 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
phenylacetic acid degradation protein paaN Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
phenylacetic acid degradation protein paaN
scnpilot_p_inoc_scaffold_292_67
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(67169..68302)
DNA (1134bp) protein (378aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein; K01760 cystathionine beta-lyase [EC:4.4.1.8] id=7718708 bin=BACIGN_2 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
cystathionine beta-lyase (EC:2.5.1.48)
cystathionine gamma-lyase Tax=CG_Ignavi_01
scnpilot_p_inoc_scaffold_292_68
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(68385..68969)
DNA (585bp) protein (195aa)
id=7718707 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
id=7718707 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_292_69
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(69100..73536)
DNA (4437bp) protein (1479aa)
Putative protease id=7718706 bin=BACIGN_2 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein Tax=GWF2_RIF_IGX_33_9_curated
scnpilot_p_inoc_scaffold_292_70
unknown

Not on your lists

comp(73742..73831)
DNA (90bp) protein (30aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_292_71
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(73980..76760)
DNA (2781bp) protein (927aa)
id=7718705 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
Ig domain-containing protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
scnpilot_p_inoc_scaffold_292_72
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

76958..77857
DNA (900bp) protein (300aa)
transketolase; K00615 transketolase [EC:2.2.1.1] id=7718704 bin=BACIGN_2 species=Thermovirga lienii genus=Thermovirga taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=BACIGN_2 organism_group=Unknown_CP rbh
transketolase
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_p_inoc_scaffold_292_73
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

77921..78907
DNA (987bp) protein (329aa)
transketolase ; K00615 transketolase [EC:2.2.1.1] id=7718703 bin=BACIGN_2 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
transketolase ; K00615 transketolase [EC:2.2.1.1] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
transketolase
scnpilot_p_inoc_scaffold_292_74
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

78973..80448
DNA (1476bp) protein (492aa)
cca; tRNA nucleotidyltransferase id=7718702 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
cca; tRNA nucleotidyltransferase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
cca; tRNA nucleotidyltransferase
scnpilot_p_inoc_scaffold_292_75
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

80445..80996
DNA (552bp) protein (184aa)
acetyltransferase id=7718701 bin=BACIGN_2 species=Pelodictyon luteolum genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP rbh
transferase Tax=GWA2_Ignavibacteria_54_16_curated
acetyltransferase
scnpilot_p_inoc_scaffold_292_76
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

80999..81202
DNA (204bp) protein (68aa)
id=7718700 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718700 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_292_77
CSP1_5_NC10, NC10, Bacteria

Not on your lists

81208..82416
DNA (1209bp) protein (403aa)
hypothetical protein id=7718699 bin=BACIGN_2 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=BACIGN_2 organism_group=Unknown_CP rbh
dioxygenase Tax=CSP1_5_NC10
dioxygenase
scnpilot_p_inoc_scaffold_292_78
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


82504..82974
DNA (471bp) protein (157aa)
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 id=7718698 bin=BACIGN_2 species=Enhydrobacter aerosaccus genus=Enhydrobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
rplM; 50S ribosomal protein L13
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_p_inoc_scaffold_292_79
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists


83000..83386
DNA (387bp) protein (129aa)
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=7718697 bin=BACIGN_2 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
rpsI; 30S ribosomal protein S9
scnpilot_p_inoc_scaffold_292_80
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists


83555..84364
DNA (810bp) protein (270aa)
rpsB; Ribosomal protein S2; K02967 small subunit ribosomal protein S2 id=7718696 bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
rpsB; Ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=GWF2_RIF_IGX_33_9_curated
30S ribosomal protein S2
scnpilot_p_inoc_scaffold_292_81
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

84396..85256
DNA (861bp) protein (287aa)
tsf; translation elongation factor Ts; K02357 elongation factor Ts id=7718695 bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
translation elongation factor Ts Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
translation elongation factor Ts
scnpilot_p_inoc_scaffold_292_82
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

85285..85998
DNA (714bp) protein (238aa)
uridylate kinase (EC:2.7.4.22); K09903 uridylate kinase [EC:2.7.4.22] id=7718694 bin=BACIGN_2 species=Flavobacteriaceae bacterium S85 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
uridylate kinase (EC:2.7.4.22)
uridylate kinase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
scnpilot_p_inoc_scaffold_292_83
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

86055..86615
DNA (561bp) protein (187aa)
ribosome recycling factor; K02838 ribosome recycling factor id=7718693 bin=BACIGN_2 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP rbh
ribosome recycling factor Tax=GWA2_Ignavibacteriae_55_25_curated
ribosome recycling factor
scnpilot_p_inoc_scaffold_292_84
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

86711..87424
DNA (714bp) protein (238aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine
queC; Queuosine biosynthesis protein QueC; K06920 queuosine biosynthesis protein QueC id=7718692 bin=BACIGN_2 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
queC; Queuosine biosynthesis protein QueC
scnpilot_p_inoc_scaffold_292_85
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

87520..88311
DNA (792bp) protein (264aa)
id=7718691 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
id=7718691 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_292_86
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

88342..89145
DNA (804bp) protein (268aa)
id=7718690 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
id=7718690 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_292_87
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

89223..89768
DNA (546bp) protein (182aa)
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=7718689 bin=BACIGN_2 species=Jonesia denitrificans genus=Jonesia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
ECF subfamily RNA polymerase sigma-24 subunit
scnpilot_p_inoc_scaffold_292_88
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

89755..90942
DNA (1188bp) protein (396aa)
id=7718688 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_p_inoc_scaffold_292_89
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

90939..91517
DNA (579bp) protein (193aa)
id=7718687 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
id=7718687 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_292_90
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

91601..92191
DNA (591bp) protein (197aa)
id=7718686 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
glycoside hydrolase family 43 Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Displaying items 61-90 of 130 in total

View Taxonomy