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scnpilot_p_inoc_scaffold_2_299

Organism: SCNpilot_P_inoc_Kapabacteria_57_18

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 354303..354857

Top 3 Functional Annotations

Value Algorithm Source
rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM id=7716972 bin=BACIGN_2 species=Sporosarcina newyorkensis genus=Sporosarcina taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 185.0
  • Bit_score: 361
  • Evalue 5.20e-97
  • rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1027292 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Sporosarcina.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 31.1
  • Coverage: 167.0
  • Bit_score: 84
  • Evalue 1.70e-13
rimM; 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 27.7
  • Coverage: 166.0
  • Bit_score: 82
  • Evalue 1.30e-13

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Taxonomy

Sporosarcina newyorkensis → Sporosarcina → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 555
ATGGCCAGCCCGTTCACTGAATATCTCGGCGTAGTCGGACGTACTCACGGTACCGATGGCACGGTCGTCCTGCAGGACACCGTGGGCATCCGTACCGTGCTGCGTATCGGGAGCACCATCGGCATAGGCTATTCGAGAGAATTCGCCCGCCCGTTCACGCTCGCAGGCTTCGAGGACAATCCTCCCCTGCTGCGCCTGCGCCTGCGCGAGTGCCCCACCGTCGAAGCCGCACGAGCCCTGATCGACCAGGCCGTCTACATCAGCTCCGAAGACCTCGTCGCGGATCAGGACGGACGCTTCGCCATCGGCGACATCGAAGGCAGTCGCGTCATGACCGACGACGGGCTGGAACTTGGTACGGTTTCGGAAGTATGGCTCTTGCCGGCCAACGACGTATGGATCGTGACCCGCCCCGATGGGTCGACGGTCCCCGTACCGGTAGTGGACTCCGTGGTACGGTCGGTCGACGTCGAGCACAGGATCATCACGATCCATCTGCTCGATGGTCTCGTGGACGTCGATACTCCATCGTCACCGGAGGATCACGATGAGTGA
PROTEIN sequence
Length: 185
MASPFTEYLGVVGRTHGTDGTVVLQDTVGIRTVLRIGSTIGIGYSREFARPFTLAGFEDNPPLLRLRLRECPTVEAARALIDQAVYISSEDLVADQDGRFAIGDIEGSRVMTDDGLELGTVSEVWLLPANDVWIVTRPDGSTVPVPVVDSVVRSVDVEHRIITIHLLDGLVDVDTPSSPEDHDE*