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scnpilot_p_inoc_scaffold_292_99

Organism: SCNpilot_P_inoc_Kapabacteria_57_18

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 105892..106356

Top 3 Functional Annotations

Value Algorithm Source
transcription activator effector-binding protein id=7718678 bin=BACIGN_2 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 155.0
  • Bit_score: 321
  • Evalue 3.90e-85
  • rbh
Transcriptional activator ligand binding domain protein {ECO:0000313|EMBL:EGW21774.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloba similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 154.0
  • Bit_score: 185
  • Evalue 6.00e-44
transcriptional activator ligand binding domain protein similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 152.0
  • Bit_score: 178
  • Evalue 1.90e-42

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Taxonomy

Methylobacter tundripaludum → Methylobacter → Methylococcales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGCTCACCGAACCCACCATCGTCGAGACGTCGGCCCAGGCATCGGCCGTCATCCGTCTTACCATTCCGCGTTCGGAGATCCAGAACTCGATGGGGCCCGCCTTCCAGGAACTGATGGGTACGATCGCCGCCCAGGGAATCGCGCCCACGGGTGCTGCTTATTCCCATCATTTCCGGTTCGATCCCGACGTCTTCGATTTCGAGGTCGGTGTCCCGGTATCGGCTCCGGTGCAGGCTTCAGGACGTGTCGTACCCGGTGAACTTCCGGCGGCAACGGTAGCGCGTACGTACTATCAAGGACCCTACGAAGGTCTTGGGCCGGCCTGGGGCGAGTTCGGCGAATGGCTCGCGTCGCATGGATACGACACGCAGCAGAGTCTGTGGGAGTCCTACGTCGAAGGTCCGGGAACGCAGCCGGATCCGACGAAATGGCGTACGGAGCTGAACAGACCGCTGAACAAGTGA
PROTEIN sequence
Length: 155
MLTEPTIVETSAQASAVIRLTIPRSEIQNSMGPAFQELMGTIAAQGIAPTGAAYSHHFRFDPDVFDFEVGVPVSAPVQASGRVVPGELPAATVARTYYQGPYEGLGPAWGEFGEWLASHGYDTQQSLWESYVEGPGTQPDPTKWRTELNRPLNK*